C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor B2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366514 TFB2M-001 ENSG00000162851 9606 - 1:246540560-246566324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366514 1.908±0.00 3.538±0.00 1.397±0.00 2.081±0.29 4.464±0.00 2.478±0.25 2.437±2.26 4.717±0.91 5.758±4.03 1.694±0.38 2.982±0.94 3.308±0.90 3.264±0.49 4.847±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AO CIL_0007AO_0002 CGP 1:245749342-246566324
CIL_0007AN CIL_0007AN_0002 CGP 1:246540560-246668584

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000154 IEA rRNA modification
GO:0000179 IEA rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003712 IDA:IEA transcription cofactor activity
GO:0005739 IEA mitochondrion
GO:0005759 IDA mitochondrial matrix
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006390 IDA transcription from mitochondrial promoter
GO:0006391 IDA:IEA transcription initiation from mitochondrial promoter
GO:0008649 IEA rRNA methyltransferase activity
GO:0010467 TAS gene expression
GO:0031167 IEA rRNA methylation
GO:0042645 IDA mitochondrial nucleoid
GO:0044822 IDA poly(A) RNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027769 Tfb2m-001 protein_coding Mus_musculus 0 364
ENSMUST00000169406 Gm1818-201 protein_coding Mus_musculus 0 364

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