C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tropomodulin 4 (muscle)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163157 TMOD4 9606 - 1:151169986-151176284 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295314 TMOD4-001 151169987-151176016 protein_coding
  ENST00000441701 TMOD4-005 151172329-151175976 protein_coding
  ENST00000463543 TMOD4-002 151169988-151175981 nonsense_mediated_decay
  ENST00000466891 TMOD4-004 151169986-151172315 protein_coding
  ENST00000488488 TMOD4-006 151171433-151175949 processed_transcript
  ENST00000601585 TMOD4-007 151175617-151176284 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleENST00000295314
Transcript ID Breast Muscle
ENST00000295314 12.509±0.00 181.576±116.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UG CIL_0000UG_0002 CGP 1:151156664-151170297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005523 IEA tropomyosin binding
GO:0005856 IEA cytoskeleton
GO:0005865 IEA striated muscle thin filament
GO:0006936 TAS muscle contraction
GO:0051694 IEA pointed-end actin filament capping

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020890 tmod4 tropomodulin 4 (muscle) protein_coding Danio_rerio
ENSMUSG00000005628 Tmod4 tropomodulin 4 protein_coding Mus_musculus

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