C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tropomodulin 4 (muscle)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295314 TMOD4-001 ENSG00000163157 9606 - 1:151169987-151176016 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleENST00000295314
Transcript ID Breast Muscle
ENST00000295314 12.509±0.00 181.576±116.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UG CIL_0000UG_0002 CGP 1:151156664-151170297

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005523 IEA tropomyosin binding
GO:0005865 IEA striated muscle thin filament
GO:0006936 TAS muscle contraction
GO:0051694 IEA pointed-end actin filament capping

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107227 Tmod4-005 protein_coding Mus_musculus 0 1524
ENSMUST00000005769 Tmod4-001 protein_coding Mus_musculus 0 1469
ENSMUST00000130545 Tmod4-002 retained_intron Mus_musculus 0 946
ENSMUST00000131597 Tmod4-006 protein_coding Mus_musculus 0 798
ENSMUST00000135867 Tmod4-003 protein_coding Mus_musculus 0 366
ENSDART00000024294 tmod4-201 protein_coding Danio_rerio 0 230
ENSDART00000137153 tmod4-001 protein_coding Danio_rerio 0 230

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