C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tropomodulin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005628 Tmod4 10090 + 3:95124476-95129209 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005769 Tmod4-001 95124514-95129209 protein_coding
  ENSMUST00000107227 Tmod4-005 95124515-95129205 protein_coding
  ENSMUST00000130545 Tmod4-002 95126204-95128744 retained_intron
  ENSMUST00000131597 Tmod4-006 95124476-95127653 protein_coding
  ENSMUST00000135867 Tmod4-003 95127170-95127866 protein_coding
  ENSMUST00000149898 Tmod4-004 95127653-95129208 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005769ENSMUST00000107227ENSMUST00000130545ENSMUST00000131597ENSMUST00000135867ENSMUST00000149898
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005769 0.098±0.00 N/A 0.274±0.01 0.283±0.04 17.639±16.13 0.419±0.05 6.060±1.14 0.843±0.41 0.159±0.13 0.652±0.30 178.777±8.74 0.324±0.14 0.194±0.10 0.750±0.00
ENSMUST00000107227 N/A N/A N/A N/A 9.371±0.70 N/A 2.404±0.66 0.367±0.00 0.136±0.00 0.614±0.00 74.372±5.37 0.390±0.00 N/A N/A
ENSMUST00000130545 0.385±0.00 0.108±0.00 N/A 0.138±0.06 11.465±6.73 0.188±0.00 1.443±0.00 0.079±0.00 N/A 0.669±0.31 N/A 0.443±0.26 0.113±0.01 N/A
ENSMUST00000131597 N/A N/A N/A N/A 8.505±8.23 N/A N/A 0.096±0.01 N/A 0.524±0.06 N/A 0.346±0.06 0.407±0.18 N/A
ENSMUST00000135867 N/A 0.419±0.00 N/A N/A N/A N/A N/A 0.429±0.00 N/A N/A N/A 1.762±0.00 N/A N/A
ENSMUST00000149898 N/A 0.382±0.15 N/A 0.308±0.10 N/A 0.563±0.27 N/A 0.556±0.09 0.162±0.07 0.479±0.00 N/A 0.494±0.24 0.342±0.26 1.064±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064I CIL_00064I_0002 CGP 3:95111022-95129209
CIL_0003MO CIL_0003MO_0002 CGP 3:95124476-95134011

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005523 IDA tropomyosin binding
GO:0005865 IDA striated muscle thin filament
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020890 tmod4 tropomodulin 4 (muscle) protein_coding Danio_rerio
ENSG00000163157 TMOD4 tropomodulin 4 (muscle) protein_coding Homo_sapiens

Loading