C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L22-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163584 RPL22L1 9606 - 3:170864875-170870483 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000295830 RPL22L1-001 170864875-170870483 protein_coding
  ENST00000463836 RPL22L1-004 170866268-170870195 protein_coding
  ENST00000466674 RPL22L1-006 170866264-170870033 protein_coding
  ENST00000475836 RPL22L1-002 170866263-170870195 nonsense_mediated_decay
  ENST00000478578 RPL22L1-008 170865794-170868181 retained_intron
  ENST00000494771 RPL22L1-007 170866267-170870208 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295830ENST00000463836ENST00000466674ENST00000475836ENST00000478578ENST00000494771
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295830 N/A 1.877±0.00 0.286±0.00 0.494±0.05 0.211±0.00 0.893±0.00 0.242±0.00 N/A N/A 0.281±0.00 N/A 0.530±0.00 0.410±0.00 N/A
ENST00000463836 13.542±0.00 43.190±0.00 N/A 6.295±3.98 12.952±6.28 7.529±6.26 2.376±2.05 16.213±0.00 24.177±0.00 9.697±5.82 0.567±0.00 20.898±20.33 8.115±3.67 19.962±17.77
ENST00000466674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A
ENST00000475836 4.113±0.00 N/A N/A N/A N/A 6.674±0.00 2.036±0.00 N/A 7.598±0.00 11.977±11.24 6.613±0.00 7.088±4.40 2.662±1.02 1.993±0.00
ENST00000478578 N/A N/A N/A 1.486±0.00 N/A 1.771±0.00 N/A 1.155±0.00 0.374±0.00 N/A N/A 1.989±0.25 0.973±0.00 N/A
ENST00000494771 N/A N/A N/A N/A N/A N/A 1.357±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049R CIL_00049R_0002 CGP 3:170864875-170908693

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010244 rpl22l1 ribosomal protein L22-like 1 protein_coding Danio_rerio
ENSMUSG00000039221 Rpl22l1 ribosomal protein L22 like 1 protein_coding Mus_musculus

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