C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L22-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000475836 RPL22L1-002 ENSG00000163584 9606 - 3:170866263-170870195 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000475836
Transcript ID Adipose Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000475836 4.113±0.00 6.674±0.00 2.036±0.00 7.598±0.00 11.977±11.24 6.613±0.00 7.088±4.40 2.662±1.02 1.993±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049R CIL_00049R_0002 CGP 3:170864875-170908693

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043867 Rpl22l1-201 protein_coding Mus_musculus 0 387
ENSMUST00000118224 Gm15421-001 transcribed_processed_pseudogene Mus_musculus 0 381
ENSMUST00000051985 Orc5-004 processed_transcript Mus_musculus 0 364
ENSMUST00000119605 Gm4910-001 processed_pseudogene Mus_musculus 1e-30 137

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