C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L22-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295830 RPL22L1-001 ENSG00000163584 9606 - 3:170864875-170870483 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartLungOvaryPlacentaENST00000295830
Transcript ID Adrenal Bladder Brain Breast Colon Heart Lung Ovary Placenta
ENST00000295830 1.877±0.00 0.286±0.00 0.494±0.05 0.211±0.00 0.893±0.00 0.242±0.00 0.281±0.00 0.530±0.00 0.410±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049R CIL_00049R_0002 CGP 3:170864875-170908693

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043867 Rpl22l1-201 protein_coding Mus_musculus 0 547
ENSMUST00000118224 Gm15421-001 transcribed_processed_pseudogene Mus_musculus 0 538
ENSMUST00000051985 Orc5-004 processed_transcript Mus_musculus 0 521
ENSMUST00000119605 Gm4910-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000029674 Efna4-001 protein_coding Mus_musculus 0.000003 58

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