C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L22-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000478578 RPL22L1-008 ENSG00000163584 9606 - 3:170865794-170868181 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverOvaryPlacentaENST00000478578
Transcript ID Brain Colon Kidney Liver Ovary Placenta
ENST00000478578 1.486±0.00 1.771±0.00 1.155±0.00 0.374±0.00 1.989±0.25 0.973±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049R CIL_00049R_0002 CGP 3:170864875-170908693

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043867 Rpl22l1-201 protein_coding Mus_musculus 0 387
ENSMUST00000118224 Gm15421-001 transcribed_processed_pseudogene Mus_musculus 0 381
ENSMUST00000051985 Orc5-004 processed_transcript Mus_musculus 0 364
ENSMUST00000029674 Efna4-001 protein_coding Mus_musculus 0.000001 58

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