C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chemokine (C-X-C motif) ligand 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163734 CXCL3 9606 - 4:74036589-74038807 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296026 CXCL3-001 74036589-74038689 protein_coding
  ENST00000502974 CXCL3-003 74037132-74038689 processed_transcript
  ENST00000510390 CXCL3-004 74037656-74038650 processed_transcript
  ENST00000511669 CXCL3-002 74037069-74038807 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296026ENST00000502974ENST00000510390ENST00000511669
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296026 0.142±0.00 0.211±0.00 N/A 0.038±0.03 0.386±0.08 0.112±0.00 N/A 0.201±0.00 0.323±0.02 2.586±1.02 0.134±0.00 5.157±3.70 0.525±0.43 0.189±0.06
ENST00000502974 N/A N/A 0.535±0.00 N/A N/A 0.103±0.00 0.233±0.00 N/A N/A 5.563±0.00 0.325±0.00 12.500±0.00 0.073±0.00 N/A
ENST00000510390 0.221±0.00 0.202±0.00 N/A N/A N/A N/A N/A N/A 0.442±0.00 N/A N/A N/A N/A N/A
ENST00000511669 0.139±0.00 0.212±0.00 0.126±0.00 N/A 0.396±0.00 0.172±0.00 0.074±0.06 0.071±0.00 0.036±0.00 0.764±0.00 N/A 1.274±0.94 0.051±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035G CIL_00035G_0001 CGP 4:74036589-74099293

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 TAS:IEA extracellular region
GO:0005615 IDA extracellular space
GO:0006954 IEA inflammatory response
GO:0006955 IEA immune response
GO:0008009 ISS:IEA chemokine activity
GO:0030593 ISS neutrophil chemotaxis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000029379 Cxcl3 chemokine (C-X-C motif) ligand 3 protein_coding Mus_musculus
ENSMUSG00000029380 Cxcl1 chemokine (C-X-C motif) ligand 1 protein_coding Mus_musculus
ENSMUSG00000058427 Cxcl2 chemokine (C-X-C motif) ligand 2 protein_coding Mus_musculus

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