C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chemokine (C-X-C motif) ligand 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029379 Cxcl3 10090 + 5:90786103-90788086 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031326 Cxcl3-201 90786103-90788086 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000031326
Transcript ID Adipose Adrenal Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000031326 0.109±0.05 0.125±0.08 0.034±0.00 0.025±0.01 0.156±0.07 0.061±0.02 0.025±0.02 0.742±0.21 0.336±0.21 0.215±0.11 0.066±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035Y CIL_00035Y_0002 CGP 5:90772435-90788086

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 ISS extracellular space
GO:0006954 IEA inflammatory response
GO:0006955 IEA immune response
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0008009 IDA chemokine activity
GO:0030593 IDA neutrophil chemotaxis
GO:0032496 IEA response to lipopolysaccharide
GO:0071222 IEA cellular response to lipopolysaccharide

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000081041 CXCL2 chemokine (C-X-C motif) ligand 2 protein_coding Homo_sapiens
ENSG00000163734 CXCL3 chemokine (C-X-C motif) ligand 3 protein_coding Homo_sapiens
ENSG00000163739 CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) protein_coding Homo_sapiens

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