C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00035G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163734-ENSG00000081041 CGP 9606 4:74036589-74099293
GeneTranscriptPositionBiotype
ENSG00000081041 (CXCL2)
chemokine (C-X-C motif) ligand 2 		ENST00000296031 (CXCL2-003) 74097676-74099195 processed_transcript
ENST00000508487 (CXCL2-001) 74097035-74099293 protein_coding
ENST00000510048 (CXCL2-002) 74098531-74099196 retained_intron
ENSG00000163734 (CXCL3)
chemokine (C-X-C motif) ligand 3 		ENST00000296026 (CXCL3-001) 74036589-74038689 protein_coding
ENST00000502974 (CXCL3-003) 74037132-74038689 processed_transcript
ENST00000510390 (CXCL3-004) 74037656-74038650 processed_transcript
ENST00000511669 (CXCL3-002) 74037069-74038807 processed_transcript
ENSG00000248848 (PPBPP2)
pro-platelet basic protein pseudogene 2 		ENST00000513150 (PPBPP2-002) 74054038-74055399 processed_transcript
ENST00000514391 (PPBPP2-001) 74054041-74054820 transcribed_unprocessed_pseudogene
ENSG00000251017 (RP11-629B11.4)
 ENST00000514414 (RP11-629B11.4-001) 74085995-74086672 processed_pseudogene
CIL_00035G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029380-ENSMUSG00000058427 CGP 10090 5:90891241-90905909
GeneTranscriptPositionBiotype
ENSMUSG00000029380 (Cxcl1)
chemokine (C-X-C motif) ligand 1 		ENSMUST00000031327 (Cxcl1-001) 90891241-90893115 protein_coding
ENSMUSG00000058427 (Cxcl2)
chemokine (C-X-C motif) ligand 2 		ENSMUST00000075433 (Cxcl2-201) 90903899-90905909 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035G_0001ENSG00000081041ENST00000296031ENST00000508487ENST00000510048ENSG00000163734ENST00000296026ENST00000502974ENST00000510390ENST00000511669ENSG00000248848ENST00000513150ENST00000514391ENSG00000251017ENST00000514414CIL_00035G_0002ENSMUSG00000029380ENSMUST00000031327ENSMUSG00000058427ENSMUST00000075433
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00035G_0001ENSG00000081041ENST00000296031ENST00000508487ENST00000510048ENSG00000163734ENST00000296026ENST00000502974ENST00000510390ENST00000511669ENSG00000248848ENST00000513150ENSG00000251017ENST00000514414CIL_00035G_0002ENSMUSG00000029380ENSMUST00000031327ENSMUSG00000058427ENSMUST00000075433
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000081041 ENST00000296031 N/A N/A N/A N/A N/A N/A 1.799±0.00 N/A N/A 21.103±0.00 N/A N/A N/A N/A
ENST00000508487 0.775±0.00 N/A 0.506±0.00 0.609±0.09 2.450±1.38 0.552±0.41 0.936±0.00 27.160±0.00 18.817±15.30 8.909±6.47 1.152±0.47 7.483±4.60 0.750±0.62 1.237±0.92
ENST00000510048 0.613±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.728±0.00 N/A N/A 0.125±0.00 N/A
ENSG00000163734 ENST00000296026 0.142±0.00 0.211±0.00 N/A 0.038±0.03 0.386±0.08 0.112±0.00 N/A 0.201±0.00 0.323±0.02 2.586±1.02 0.134±0.00 5.157±3.70 0.525±0.43 0.189±0.06
ENST00000502974 N/A N/A 0.535±0.00 N/A N/A 0.103±0.00 0.233±0.00 N/A N/A 5.563±0.00 0.325±0.00 12.500±0.00 0.073±0.00 N/A
ENST00000510390 0.221±0.00 0.202±0.00 N/A N/A N/A N/A N/A N/A 0.442±0.00 N/A N/A N/A N/A N/A
ENST00000511669 0.139±0.00 0.212±0.00 0.126±0.00 N/A 0.396±0.00 0.172±0.00 0.074±0.06 0.071±0.00 0.036±0.00 0.764±0.00 N/A 1.274±0.94 0.051±0.00 N/A
ENSG00000248848 ENST00000513150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00
ENST00000514391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251017 ENST00000514414 N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A 0.013±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029380 ENSMUST00000031327 1.208±0.64 3.122±1.35 0.588±0.14 0.053±0.03 3.425±2.51 0.972±0.27 1.013±0.46 0.645±0.47 1.882±1.05 1.333±0.71 0.071±0.02 4.495±2.22 2.291±1.20 0.140±0.08
ENSMUSG00000058427 ENSMUST00000075433 0.181±0.12 0.233±0.15 0.009±0.00 0.008±0.00 0.132±0.01 0.119±0.04 0.048±0.02 0.093±0.07 0.055±0.03 0.187±0.09 0.028±0.01 0.228±0.13 0.077±0.02 N/A

Loading