C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine (C-X-C motif) ligand 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296026 CXCL3-001 ENSG00000163734 9606 - 4:74036589-74038689 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296026
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296026 0.142±0.00 0.211±0.00 0.038±0.03 0.386±0.08 0.112±0.00 0.201±0.00 0.323±0.02 2.586±1.02 0.134±0.00 5.157±3.70 0.525±0.43 0.189±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00035G CIL_00035G_0001 CGP 4:74036589-74099293

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 TAS:IEA extracellular region
GO:0005615 IDA extracellular space
GO:0006954 IEA inflammatory response
GO:0006955 IEA immune response
GO:0008009 ISS:IEA chemokine activity
GO:0030593 ISS neutrophil chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031327 Cxcl1-001 protein_coding Mus_musculus 3e-33 147

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