C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SNF related kinase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163788 SNRK 9606 + 3:43286512-43424764 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296088 SNRK-004 43286540-43351138 protein_coding
  ENST00000429705 SNRK-002 43286538-43351143 protein_coding
  ENST00000437827 SNRK-003 43286586-43348753 protein_coding
  ENST00000454177 SNRK-001 43286512-43348838 protein_coding
  ENST00000462810 SNRK-005 43303112-43333390 processed_transcript
  ENST00000468628 SNRK-008 43343351-43424764 processed_transcript
  ENST00000481892 SNRK-007 43343236-43347606 retained_intron
  ENST00000484791 SNRK-006 43332166-43340681 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296088ENST00000429705ENST00000437827ENST00000454177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296088 10.752±0.00 2.431±0.00 4.079±0.00 2.674±1.01 3.282±0.32 2.684±0.65 2.158±0.41 1.268±0.00 1.057±0.04 7.778±2.12 2.147±0.00 1.799±0.76 2.260±0.37 2.866±0.00
ENST00000429705 15.778±0.00 6.912±0.00 N/A 3.483±1.23 4.596±0.79 6.877±0.00 2.407±1.79 5.559±0.00 2.414±1.83 11.383±6.19 3.590±0.00 1.844±0.27 3.239±1.64 3.809±2.63
ENST00000437827 N/A N/A N/A N/A N/A N/A N/A 1.331±0.00 N/A N/A N/A N/A 3.428±0.00 5.625±0.00
ENST00000454177 N/A N/A N/A 1.539±0.00 N/A N/A N/A N/A 2.348±0.00 N/A 0.322±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003F0 CIL_0003F0_0001 CGP 3:43079232-43424764
CIL_0003F1 CIL_0003F1_0001 CGP 3:43286512-43691594

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IDA magnesium ion binding
GO:0004672 IEA protein kinase activity
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005524 IDA:IEA ATP binding
GO:0005634 ISS nucleus
GO:0006468 IDA:IEA protein phosphorylation
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0030099 TAS myeloid cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070832 snrka SNF related kinase a protein_coding Danio_rerio
ENSMUSG00000038145 Snrk SNF related kinase protein_coding Mus_musculus

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