Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	SNF related kinase
ENST00000296088	SNRK-004	ENSG00000163788	9606	+	3:43286540-43351138	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000296088	10.752±0.00	2.431±0.00	4.079±0.00	2.674±1.01	3.282±0.32	2.684±0.65	2.158±0.41	1.268±0.00	1.057±0.04	7.778±2.12	2.147±0.00	1.799±0.76	2.260±0.37	2.866±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0003F0	CIL_0003F0_0001	CGP	3:43079232-43424764
CIL_0003F1	CIL_0003F1_0001	CGP	3:43286512-43691594

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000287	IDA	magnesium ion binding
GO:0004672	IEA	protein kinase activity
GO:0004674	IDA	protein serine/threonine kinase activity
GO:0004713	IEA	protein tyrosine kinase activity
GO:0005524	IDA:IEA	ATP binding
GO:0005634	ISS	nucleus
GO:0006468	IDA:IEA	protein phosphorylation
GO:0016772	IEA	transferase activity, transferring phosphorus-containing groups
GO:0030099	TAS	myeloid cell differentiation

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000118886	Snrk-003	protein_coding	Mus_musculus	0	2152
ENSMUST00000120173	Snrk-001	protein_coding	Mus_musculus	0	2119
ENSMUST00000134949	Snrk-002	protein_coding	Mus_musculus	0	1578
ENSMUST00000131169	Snrk-006	retained_intron	Mus_musculus	0	616
ENSMUST00000151872	Snrk-007	retained_intron	Mus_musculus	0	472
ENSMUST00000139181	Snrk-009	protein_coding	Mus_musculus	0	381
ENSMUST00000146832	Snrk-005	protein_coding	Mus_musculus	0	254
ENSMUST00000119215	Snrk-004	protein_coding	Mus_musculus	0	202
ENSMUST00000145384	Snrk-008	processed_transcript	Mus_musculus	9e-35	154

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