C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 4 (anion exchanger), member 1, adaptor protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163798 SLC4A1AP 9606 + 2:27663471-27694976 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326019 SLC4A1AP-001 27663471-27694969 protein_coding
  ENST00000427424 SLC4A1AP-003 27664467-27675692 nonsense_mediated_decay
  ENST00000492196 SLC4A1AP-002 27691558-27694973 retained_intron
  ENST00000613058 SLC4A1AP-201 27663471-27694976 protein_coding
  ENST00000613517 SLC4A1AP-004 27663915-27677297 protein_coding
  ENST00000618046 SLC4A1AP-005 27663889-27694972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326019ENST00000618046
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.959±0.00
ENST00000618046 7.682±0.00 8.123±0.00 12.734±5.91 6.634±1.18 6.811±0.00 4.128±2.14 7.558±3.84 3.933±0.00 4.520±0.09 7.714±0.00 10.959±5.58 11.107±5.14 42.617±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013M CIL_00013M_0001 CGP 2:27628247-27663840
CIL_0003JM CIL_0003JM_0002 CGP 2:27650812-27694976
CIL_00013J CIL_00013J_0001 CGP 2:27663471-27988087

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034160 slc4a1ap solute carrier family 4 (anion exchanger), member 1, adaptor protein protein_coding Danio_rerio
ENSMUSG00000029141 Slc4a1ap solute carrier family 4 (anion exchanger), member 1, adaptor protein protein_coding Mus_musculus

Loading