C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 4 (anion exchanger), member 1, adaptor protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029141 Slc4a1ap 10090 + 5:31526995-31554042 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000114533 Slc4a1ap-001 31526997-31554040 protein_coding
  ENSMUST00000117262 Slc4a1ap-002 31527012-31554042 protein_coding
  ENSMUST00000117319 Slc4a1ap-003 31527012-31536822 protein_coding
  ENSMUST00000127416 Slc4a1ap-004 31526997-31534449 retained_intron
  ENSMUST00000131584 Slc4a1ap-008 31527601-31532228 retained_intron
  ENSMUST00000138086 Slc4a1ap-006 31543594-31554038 retained_intron
  ENSMUST00000146720 Slc4a1ap-005 31526995-31529405 retained_intron
  ENSMUST00000149198 Slc4a1ap-009 31531973-31534990 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114533ENSMUST00000117262ENSMUST00000127416ENSMUST00000131584ENSMUST00000149198
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114533 N/A N/A 2.890±0.33 8.318±6.06 N/A 2.443±0.00 2.402±0.00 3.340±0.00 3.693±0.61 N/A 2.552±0.52 6.258±2.88 9.425±7.82 14.224±0.00
ENSMUST00000117262 1.751±0.00 N/A 2.946±0.32 7.799±4.46 2.555±0.00 N/A 1.352±0.01 N/A 2.587±0.88 N/A 2.019±0.27 6.780±4.63 7.265±4.47 6.596±7.41
ENSMUST00000127416 3.322±0.00 11.559±2.23 N/A N/A 10.053±1.10 6.828±0.70 N/A 5.311±0.16 2.955±1.22 8.133±1.65 N/A 9.296±1.66 N/A 3.115±0.83
ENSMUST00000131584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 46.533±0.00
ENSMUST00000149198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.922±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013M CIL_00013M_0002 CGP 5:31494741-31527807
CIL_0003JM CIL_0003JM_0003 CGP 5:31514569-31554042
CIL_00013J CIL_00013J_0002 CGP 5:31526995-31701972

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034160 slc4a1ap solute carrier family 4 (anion exchanger), member 1, adaptor protein protein_coding Danio_rerio
ENSG00000163798 SLC4A1AP solute carrier family 4 (anion exchanger), member 1, adaptor protein protein_coding Homo_sapiens

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