C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4 (anion exchanger), member 1, adaptor protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618046 SLC4A1AP-005 ENSG00000163798 9606 + 2:27663889-27694972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000618046
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000618046 7.682±0.00 8.123±0.00 12.734±5.91 6.634±1.18 6.811±0.00 4.128±2.14 7.558±3.84 3.933±0.00 4.520±0.09 7.714±0.00 10.959±5.58 11.107±5.14 42.617±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013M CIL_00013M_0001 CGP 2:27628247-27663840
CIL_0003JM CIL_0003JM_0002 CGP 2:27650812-27694976
CIL_00013J CIL_00013J_0001 CGP 2:27663471-27988087

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117262 Slc4a1ap-002 protein_coding Mus_musculus 0 2036
ENSMUST00000114533 Slc4a1ap-001 protein_coding Mus_musculus 0 1744
ENSMUST00000117319 Slc4a1ap-003 protein_coding Mus_musculus 0 1450
ENSMUST00000131584 Slc4a1ap-008 retained_intron Mus_musculus 0 558
ENSMUST00000127416 Slc4a1ap-004 retained_intron Mus_musculus 0 545
ENSMUST00000146720 Slc4a1ap-005 retained_intron Mus_musculus 0 534
ENSMUST00000149198 Slc4a1ap-009 retained_intron Mus_musculus 0 505
ENSMUST00000138086 Slc4a1ap-006 retained_intron Mus_musculus 0 302

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