C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L39-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000163923 RPL39L 9606 - 3:187120948-187180908 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296277 RPL39L-002 187120948-187139523 protein_coding
  ENST00000433055 RPL39L-003 187120948-187180908 protein_coding
  ENST00000455270 RPL39L-001 187120948-187139484 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296277ENST00000433055ENST00000455270
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296277 3.194±0.00 6.679±0.00 N/A 2.839±1.05 5.268±0.00 3.860±3.48 1.157±1.09 2.371±0.00 0.647±0.14 2.819±0.00 N/A 25.419±19.64 3.135±0.44 77.450±14.90
ENST00000433055 N/A N/A 0.766±0.00 0.321±0.00 1.263±0.00 N/A N/A N/A 0.202±0.00 2.289±0.00 0.521±0.00 N/A N/A N/A
ENST00000455270 0.774±0.00 N/A N/A N/A N/A 0.759±0.39 0.131±0.00 N/A N/A N/A 0.868±0.00 12.708±0.00 1.936±0.00 10.426±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LA CIL_0008LA_0001 VISTA 3:186647123-187250687

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0007283 IEP spermatogenesis
GO:0022625 NAS cytosolic large ribosomal subunit

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036316 rpl39 ribosomal protein L39 protein_coding Danio_rerio
ENSMUSG00000039209 Rpl39l ribosomal protein L39-like protein_coding Mus_musculus

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