C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L39
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036316 rpl39 7955 - 14:34306764-34309051 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000052761 rpl39-001 34306765-34309051 protein_coding
  ENSDART00000146274 rpl39-002 34306764-34308937 retained_intron
  ENSDART00000146999 rpl39-003 34308032-34309011 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000052761ENSDART00000146274ENSDART00000146999
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000052761 128.282±146.80 1136.860±435.93 374.612±346.80 635.923±0.00 803.574±0.00
ENSDART00000146274 3.322±2.77 41.488±0.00 59.276±0.00 N/A N/A
ENSDART00000146999 0.287±0.06 0.884±0.00 2.195±0.44 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000176 CIL_000176_0001 CGP 14:34305436-34309051
CIL_000175 CIL_000175_0001 CGP 14:34306764-34326116

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163923 RPL39L ribosomal protein L39-like protein_coding Homo_sapiens
ENSG00000198918 RPL39 ribosomal protein L39 protein_coding Homo_sapiens
ENSMUSG00000039209 Rpl39l ribosomal protein L39-like protein_coding Mus_musculus
ENSMUSG00000079641 Rpl39 ribosomal protein L39 protein_coding Mus_musculus

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