C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L39-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039209 Rpl39l 10090 + 16:10170226-10174911 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044103 Rpl39l-001 10170228-10174911 protein_coding
  ENSMUST00000121292 Rpl39l-002 10170226-10174630 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044103ENSMUST00000121292
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044103 0.218±0.15 0.205±0.06 0.646±0.12 1.409±0.75 0.171±0.11 0.058±0.00 0.566±0.40 0.374±0.15 0.054±0.00 0.376±0.21 0.941±0.76 143.741±71.34
ENSMUST00000121292 N/A N/A N/A 1.110±0.00 N/A 0.088±0.00 1.331±0.00 N/A 0.115±0.01 0.757±0.54 4.059±2.28 69.415±57.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XM CIL_0007XM_0002 VISTA 16:9751117-10351975

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003735 IEA structural constituent of ribosome
GO:0005575 ND cellular_component
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0007283 IEA spermatogenesis
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036316 rpl39 ribosomal protein L39 protein_coding Danio_rerio
ENSG00000163923 RPL39L ribosomal protein L39-like protein_coding Homo_sapiens

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