C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RFT1 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394738 RFT1-002 ENSG00000163933 9606 - 3:53091665-53130453 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000394738
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000394738 3.227±0.00 4.649±0.00 1.804±0.00 1.856±0.00 3.463±0.58 2.247±0.00 1.707±0.00 3.724±0.58 4.079±0.15 1.783±0.00 1.851±0.00 4.304±0.97 8.276±1.62

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005319 IEA lipid transporter activity
GO:0006869 IEA lipid transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064230 Rft1-001 protein_coding Mus_musculus 0 1358
ENSMUST00000131097 Rft1-003 nonsense_mediated_decay Mus_musculus 0 1330
ENSMUST00000155689 Rft1-007 nonsense_mediated_decay Mus_musculus 0 865
ENSMUST00000143923 Rft1-005 processed_transcript Mus_musculus 0 289
ENSMUST00000143534 Rft1-002 retained_intron Mus_musculus 0 289
ENSDART00000085061 rft1-001 protein_coding Danio_rerio 0 268
ENSMUST00000133573 Rft1-004 processed_transcript Mus_musculus 0 200

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