C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: H2A histone family, member Z
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164032 H2AFZ 9606 - 4:99948086-99950388 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296417 H2AFZ-001 99948088-99950388 protein_coding
  ENST00000511203 H2AFZ-003 99948088-99950299 retained_intron
  ENST00000511319 H2AFZ-004 99948120-99950268 retained_intron
  ENST00000511348 H2AFZ-002 99948086-99950355 retained_intron
  ENST00000527366 H2AFZ-006 99948778-99950254 retained_intron
  ENST00000529158 H2AFZ-005 99948172-99950299 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296417ENST00000511348ENST00000527366ENST00000529158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296417 36.669±0.00 49.551±0.00 2.986±0.00 41.600±14.29 22.405±4.98 53.925±22.78 11.713±7.86 24.213±14.00 17.644±3.47 43.548±33.25 13.381±5.31 73.712±29.30 89.923±7.46 85.303±1.34
ENST00000511348 N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A N/A N/A
ENST00000527366 N/A N/A N/A N/A N/A N/A N/A 4.935±0.00 N/A N/A N/A N/A N/A N/A
ENST00000529158 25.313±0.00 29.104±0.00 N/A N/A 19.004±0.00 47.997±0.00 16.049±0.00 27.317±0.00 7.489±0.00 39.465±0.00 18.203±0.00 56.104±17.45 38.731±19.98 59.307±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000979 IDA RNA polymerase II core promoter sequence-specific DNA binding
GO:0000980 IDA RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA:IEA nucleus
GO:0005719 IDA nuclear euchromatin
GO:0005720 IDA nuclear heterochromatin
GO:0031490 IDA chromatin DNA binding
GO:0031492 IDA nucleosomal DNA binding
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome
GO:0071392 IMP cellular response to estradiol stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000037894 H2afz H2A histone family, member Z protein_coding Mus_musculus

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