C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: H2A histone family, member Z
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511348 H2AFZ-002 ENSG00000164032 9606 - 4:99948086-99950355 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungENST00000511348
Transcript ID Bladder Lung
ENST00000511348 0.262±0.00 0.697±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041045 H2afz-001 protein_coding Mus_musculus 0 734
ENSMUST00000174561 H2afz-005 protein_coding Mus_musculus 0 725
ENSMUST00000138010 H2afz-002 retained_intron Mus_musculus 0 257
ENSMUST00000125821 H2afz-003 retained_intron Mus_musculus 0 200
ENSMUST00000121866 Gm13007-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000173192 RP23-374K9.2-001 processed_pseudogene Mus_musculus 2.8026e-45 187
ENSMUST00000173790 H2afz-007 protein_coding Mus_musculus 2.8026e-45 187
ENSMUST00000173666 H2afz-006 processed_transcript Mus_musculus 2.8026e-45 187
ENSMUST00000120571 Gm14563-001 processed_pseudogene Mus_musculus 1.99993e-41 174
ENSMUST00000120206 Gm14687-001 processed_pseudogene Mus_musculus 1e-33 148
ENSMUST00000172696 H2afz-008 nonsense_mediated_decay Mus_musculus 5e-33 147
ENSMUST00000118569 Gm13930-001 processed_pseudogene Mus_musculus 0.000000000000003 88

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