C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor interacting protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164144 ARFIP1 9606 + 4:152687727-152918463 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000353617 ARFIP1-201 152779937-152911909 protein_coding
  ENST00000356064 ARFIP1-004 152779985-152910244 protein_coding
  ENST00000405727 ARFIP1-003 152779971-152910664 protein_coding
  ENST00000429148 ARFIP1-002 152779939-152911074 protein_coding
  ENST00000451320 ARFIP1-001 152779937-152912357 protein_coding
  ENST00000509413 ARFIP1-005 152780109-152810386 processed_transcript
  ENST00000510497 ARFIP1-011 152911570-152918463 processed_transcript
  ENST00000510831 ARFIP1-007 152779993-152810388 processed_transcript
  ENST00000511289 ARFIP1-008 152850643-152881173 processed_transcript
  ENST00000513361 ARFIP1-009 152850648-152881111 processed_transcript
  ENST00000514499 ARFIP1-010 152883245-152910378 processed_transcript
  ENST00000618090 ARFIP1-202 152687727-152911909 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000353617ENST00000356064ENST00000405727ENST00000429148ENST00000451320ENST00000514499ENST00000618090
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000353617 6.941±0.00 3.733±0.00 0.570±0.00 3.245±1.41 4.645±1.10 4.626±1.22 1.513±0.41 3.513±1.98 2.327±0.99 2.100±0.88 1.171±0.00 4.965±1.59 3.748±0.19 5.259±2.33
ENST00000356064 N/A N/A 1.333±0.00 0.762±0.00 N/A N/A N/A N/A 1.363±0.00 5.159±0.00 0.339±0.00 N/A N/A N/A
ENST00000405727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.736±0.00 N/A N/A
ENST00000429148 N/A N/A N/A N/A 2.101±0.00 N/A N/A N/A 2.503±0.00 N/A 0.301±0.00 2.790±0.00 N/A N/A
ENST00000451320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.192±0.00 N/A N/A
ENST00000514499 N/A N/A N/A N/A N/A N/A N/A 2.285±0.00 N/A N/A N/A N/A N/A N/A
ENST00000618090 N/A N/A N/A N/A N/A 1.281±0.00 1.321±0.00 N/A 0.543±0.00 N/A N/A 2.928±0.00 1.758±0.72 0.889±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PH CIL_0004PH_0001 CGP 4:152687727-152918463

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0003674 ND molecular_function
GO:0005829 IDA cytosol
GO:0006886 IDA intracellular protein transport
GO:0019904 IEA protein domain specific binding
GO:0032588 IDA trans-Golgi network membrane
GO:0050708 IDA regulation of protein secretion
GO:0070273 IDA phosphatidylinositol-4-phosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070055 arfip1 ADP-ribosylation factor interacting protein 1 (arfaptin 1) protein_coding Danio_rerio
ENSMUSG00000074513 Arfip1 ADP-ribosylation factor interacting protein 1 protein_coding Mus_musculus

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