C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356064 ARFIP1-004 ENSG00000164144 9606 + 4:152779985-152910244 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverLungMuscleENST00000356064
Transcript ID Bladder Brain Liver Lung Muscle
ENST00000356064 1.333±0.00 0.762±0.00 1.363±0.00 5.159±0.00 0.339±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004PH CIL_0004PH_0001 CGP 4:152687727-152918463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0003674 ND molecular_function
GO:0005829 IDA cytosol
GO:0006886 IDA intracellular protein transport
GO:0019904 IEA protein domain specific binding
GO:0032588 IDA trans-Golgi network membrane
GO:0050708 IDA regulation of protein secretion
GO:0070273 IDA phosphatidylinositol-4-phosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098990 Arfip1-001 protein_coding Mus_musculus 0 1376
ENSMUST00000154148 Arfip1-004 protein_coding Mus_musculus 0 1262
ENSMUST00000107687 Arfip1-002 protein_coding Mus_musculus 0 1118
ENSMUST00000143514 Arfip1-003 protein_coding Mus_musculus 0 1116

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