C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 9 open reading frame 24
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164972 C9orf24 9606 - 9:34379019-34397832 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000297623 C9orf24-001 34379019-34397832 protein_coding
  ENST00000379124 C9orf24-007 34379019-34381531 protein_coding
  ENST00000379126 C9orf24-002 34379019-34381538 protein_coding
  ENST00000379127 C9orf24-004 34379019-34381560 protein_coding
  ENST00000379133 C9orf24-003 34379019-34381600 protein_coding
  ENST00000444429 C9orf24-005 34382670-34397529 protein_coding
  ENST00000481295 C9orf24-008 34379019-34379775 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000297623ENST00000379124ENST00000379126ENST00000379127ENST00000379133ENST00000444429ENST00000481295
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000297623 0.179±0.00 N/A N/A N/A 0.119±0.00 N/A N/A 0.137±0.00 N/A N/A 0.137±0.00 0.097±0.01 17.358±8.12
ENST00000379124 N/A N/A N/A 0.270±0.00 N/A 1.509±0.00 N/A 0.745±0.00 N/A 1.616±0.00 N/A N/A N/A
ENST00000379126 N/A N/A 0.341±0.00 N/A 0.170±0.00 N/A N/A N/A 0.912±0.00 N/A 0.397±0.00 N/A N/A
ENST00000379127 N/A 0.476±0.00 N/A N/A N/A N/A N/A 0.939±0.00 N/A 17.924±0.00 N/A 0.050±0.00 N/A
ENST00000379133 0.231±0.00 N/A N/A 7.485±6.21 N/A 0.278±0.00 1.193±0.94 N/A N/A 48.336±0.00 18.248±24.59 0.154±0.07 N/A
ENST00000444429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.649±0.00
ENST00000481295 0.329±0.00 N/A N/A 1.886±0.00 0.591±0.00 N/A N/A N/A 0.125±0.00 N/A 0.260±0.00 N/A 17.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IW CIL_0005IW_0001 CGP 9:34366670-34397832
CIL_0005IP CIL_0005IP_0001 CGP 9:34379019-34458570

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002177 ISS manchette
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation
GO:0043014 IEA alpha-tubulin binding
GO:0043623 IEA cellular protein complex assembly
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000028441 1110017D15Rik RIKEN cDNA 1110017D15 gene protein_coding Mus_musculus

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