C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 9 open reading frame 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379133 C9orf24-003 ENSG00000164972 9606 - 9:34379019-34381600 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLungOvaryPlacentaENST00000379133
Transcript ID Adipose Brain Colon Heart Lung Ovary Placenta
ENST00000379133 0.231±0.00 7.485±6.21 0.278±0.00 1.193±0.94 48.336±0.00 18.248±24.59 0.154±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IW CIL_0005IW_0001 CGP 9:34366670-34397832
CIL_0005IP CIL_0005IP_0001 CGP 9:34379019-34458570

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002177 ISS manchette
GO:0005634 IDA nucleus
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124019 1110017D15Rik-002 processed_transcript Mus_musculus 0 497
ENSMUST00000030152 1110017D15Rik-001 protein_coding Mus_musculus 0 466
ENSMUST00000125303 1110017D15Rik-005 protein_coding Mus_musculus 0 449
ENSMUST00000123356 1110017D15Rik-003 processed_transcript Mus_musculus 0 357
ENSMUST00000095126 1110017D15Rik-006 protein_coding Mus_musculus 0 222
ENSMUST00000123865 1110017D15Rik-004 processed_transcript Mus_musculus 0 222
ENSMUST00000134546 1110017D15Rik-007 processed_transcript Mus_musculus 9e-27 124

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