C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 9 open reading frame 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297623 C9orf24-001 ENSG00000164972 9606 - 9:34379019-34397832 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyOvaryPlacentaTestisENST00000297623
Transcript ID Adipose Breast Kidney Ovary Placenta Testis
ENST00000297623 0.179±0.00 0.119±0.00 0.137±0.00 0.137±0.00 0.097±0.01 17.358±8.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IW CIL_0005IW_0001 CGP 9:34366670-34397832
CIL_0005IP CIL_0005IP_0001 CGP 9:34379019-34458570

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002177 ISS manchette
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation
GO:0043014 IEA alpha-tubulin binding
GO:0043623 IEA cellular protein complex assembly
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030152 1110017D15Rik-001 protein_coding Mus_musculus 0 946
ENSMUST00000134546 1110017D15Rik-007 processed_transcript Mus_musculus 0 547
ENSMUST00000095126 1110017D15Rik-006 protein_coding Mus_musculus 0 547
ENSMUST00000125303 1110017D15Rik-005 protein_coding Mus_musculus 0 534
ENSMUST00000124019 1110017D15Rik-002 processed_transcript Mus_musculus 0 466
ENSMUST00000123356 1110017D15Rik-003 processed_transcript Mus_musculus 0 357
ENSMUST00000123865 1110017D15Rik-004 processed_transcript Mus_musculus 0 222

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