C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 171
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164989 CCDC171 9606 + 9:15552897-16061663 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380701 CCDC171-001 15553086-15974039 protein_coding
  ENST00000432954 CCDC171-008 15777768-15876083 protein_coding
  ENST00000449575 CCDC171-003 15744505-15886805 protein_coding
  ENST00000470191 CCDC171-005 15845639-15971897 processed_transcript
  ENST00000472806 CCDC171-007 15887795-15920334 processed_transcript
  ENST00000474193 CCDC171-002 15553291-15564024 processed_transcript
  ENST00000478913 CCDC171-009 16042798-16061320 processed_transcript
  ENST00000486641 CCDC171-004 15874541-16061663 processed_transcript
  ENST00000498725 CCDC171-006 15850226-15971735 processed_transcript
  ENST00000535968 CCDC171-201 15552897-15660146 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380701ENST00000432954ENST00000449575ENST00000470191ENST00000535968
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380701 0.086±0.00 0.077±0.00 0.195±0.00 0.162±0.00 0.186±0.09 0.077±0.00 0.209±0.00 0.006±0.00 0.017±0.00 0.078±0.00 0.044±0.00 0.160±0.00 0.638±0.00
ENST00000432954 N/A 0.061±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449575 N/A 0.183±0.00 0.207±0.00 N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A 0.045±0.00 N/A
ENST00000470191 N/A N/A N/A N/A N/A N/A N/A N/A 0.337±0.00 N/A 1.013±0.00 0.255±0.00 7.964±0.00
ENST00000535968 N/A N/A N/A N/A 0.085±0.00 0.025±0.00 N/A 0.013±0.00 0.457±0.00 0.106±0.00 0.091±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051U CIL_00051U_0002 CGP 9:15464066-16061663

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027381 CCDC171 coiled-coil domain containing 171 protein_coding Danio_rerio
ENSMUSG00000052407 Ccdc171 coiled-coil domain containing 171 protein_coding Mus_musculus

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