C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 171
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380701 CCDC171-001 ENSG00000164989 9606 + 9:15553086-15974039 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380701
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380701 0.086±0.00 0.077±0.00 0.195±0.00 0.162±0.00 0.186±0.09 0.077±0.00 0.209±0.00 0.006±0.00 0.017±0.00 0.078±0.00 0.044±0.00 0.160±0.00 0.638±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051U CIL_00051U_0002 CGP 9:15464066-16061663

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053414 Ccdc171-001 protein_coding Mus_musculus 0 4193
ENSMUST00000125077 Ccdc171-006 nonsense_mediated_decay Mus_musculus 0 2837
ENSMUST00000183729 Ccdc171-005 processed_transcript Mus_musculus 0 760

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