C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serine palmitoyltransferase, small subunit A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165389 SPTSSA 9606 - 14:34432789-34462356 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298130 SPTSSA-001 34432789-34462356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298130
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298130 8.705±0.00 6.352±0.00 1.068±0.00 5.583±4.01 6.542±3.67 10.117±5.13 3.403±2.34 8.208±4.42 6.263±3.10 11.227±4.54 2.593±0.67 14.857±3.55 11.807±3.80 5.328±4.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RA CIL_0005RA_0002 CGP 14:32934933-34462774
CIL_0005R9 CIL_0005R9_0002 CGP 14:33924231-34462774
CIL_0008RR CIL_0008RR_0001 VISTA 14:33972978-34576380
CIL_0005RG CIL_0005RG_0002 CGP 14:34432789-34539711

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004758 IDA serine C-palmitoyltransferase activity
GO:0005515 IPI protein binding
GO:0016021 IEA integral component of membrane
GO:0017059 IDA serine C-palmitoyltransferase complex
GO:0030148 TAS sphingolipid biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000071203 sptssa serine palmitoyltransferase, small subunit A protein_coding Danio_rerio
ENSMUSG00000044408 Sptssa serine palmitoyltransferase, small subunit A protein_coding Mus_musculus

Loading