C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165416 SUGT1 9606 + 13:52652709-52700909 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000310528 SUGT1-003 52652866-52700909 protein_coding
  ENST00000343788 SUGT1-002 52652839-52687872 protein_coding
  ENST00000483074 SUGT1-001 52652709-52665649 processed_transcript
  ENST00000609175 SUGT1-004 52687144-52689945 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000310528ENST00000343788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000310528 1.507±0.00 1.184±0.00 2.015±0.00 4.345±1.24 1.323±0.32 1.653±0.48 1.410±0.18 1.167±0.79 2.080±1.76 1.234±0.69 0.975±0.00 2.766±1.07 0.587±0.29 1.788±0.01
ENST00000343788 12.483±0.00 9.263±0.00 11.784±0.00 9.527±1.97 9.809±1.45 18.569±7.32 6.588±1.93 10.188±4.51 9.937±2.11 10.306±2.15 3.533±1.00 16.344±8.10 10.187±2.32 24.456±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MD CIL_0000MD_0001 CGP 13:52652709-52739812

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 TAS ubiquitin ligase complex
GO:0000776 TAS kinetochore
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0007067 TAS mitotic nuclear division
GO:0035872 TAS nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
GO:0045087 TAS innate immune response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020608 sgut1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000022024 Sugt1 SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) protein_coding Mus_musculus

Loading