C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000MD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165416-ENSG00000136110 CGP 9606 13:52652709-52739812
GeneTranscriptPositionBiotype
ENSG00000136110 (LECT1)
leukocyte cell derived chemotaxin 1 		ENST00000377962 (LECT1-001) 52703269-52739780 protein_coding
ENST00000431550 (LECT1-002) 52712716-52739352 protein_coding
ENST00000448904 (LECT1-003) 52703264-52739812 protein_coding
ENSG00000165416 (SUGT1)
SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 		ENST00000310528 (SUGT1-003) 52652866-52700909 protein_coding
ENST00000343788 (SUGT1-002) 52652839-52687872 protein_coding
ENST00000483074 (SUGT1-001) 52652709-52665649 processed_transcript
ENST00000609175 (SUGT1-004) 52687144-52689945 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0000MD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022024-ENSMUSG00000022025 CGP 10090 14:79587691-79662170
GeneTranscriptPositionBiotype
ENSMUSG00000022024 (Sugt1)
SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae) 		ENSMUST00000054908 (Sugt1-201) 79587691-79629755 protein_coding
ENSMUSG00000022025 (Lect1)
leukocyte cell derived chemotaxin 1 		ENSMUST00000022603 (Lect1-001) 79637693-79662170 protein_coding
ENSMUST00000165204 (Lect1-004) 79637816-79642195 retained_intron
ENSMUST00000165835 (Lect1-002) 79637690-79662084 protein_coding
ENSMUST00000167524 (Lect1-003) 79641987-79645658 retained_intron
ENSMUST00000172331 (Lect1-005) 79641477-79645510 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MD_0001ENSG00000136110ENST00000377962ENST00000431550ENST00000448904ENSG00000165416ENST00000310528ENST00000343788ENST00000483074ENST00000609175CIL_0000MD_0002ENSMUSG00000022024ENSMUST00000054908ENSMUSG00000022025ENSMUST00000022603ENSMUST00000165204ENSMUST00000165835ENSMUST00000167524ENSMUST00000172331
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MD_0001ENSG00000136110ENST00000377962ENST00000431550ENST00000448904ENSG00000165416ENST00000310528ENST00000343788CIL_0000MD_0002ENSMUSG00000022024ENSMUST00000054908ENSMUSG00000022025ENSMUST00000022603ENSMUST00000165204ENSMUST00000165835ENSMUST00000167524ENSMUST00000172331
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136110 ENST00000377962 0.008±0.00 0.030±0.00 N/A 0.439±0.00 0.007±0.00 N/A 0.026±0.02 0.092±0.00 N/A 0.132±0.00 N/A N/A 0.035±0.02 0.920±0.54
ENST00000431550 N/A 0.167±0.00 N/A 0.443±0.00 N/A N/A N/A N/A N/A N/A N/A 0.060±0.02 0.043±0.00 N/A
ENST00000448904 0.002±0.00 N/A N/A N/A 0.003±0.00 N/A 0.004±0.00 N/A N/A N/A N/A N/A 0.010±0.00 N/A
ENSG00000165416 ENST00000310528 1.507±0.00 1.184±0.00 2.015±0.00 4.345±1.24 1.323±0.32 1.653±0.48 1.410±0.18 1.167±0.79 2.080±1.76 1.234±0.69 0.975±0.00 2.766±1.07 0.587±0.29 1.788±0.01
ENST00000343788 12.483±0.00 9.263±0.00 11.784±0.00 9.527±1.97 9.809±1.45 18.569±7.32 6.588±1.93 10.188±4.51 9.937±2.11 10.306±2.15 3.533±1.00 16.344±8.10 10.187±2.32 24.456±0.51
ENST00000483074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022024 ENSMUST00000054908 6.083±1.87 27.160±2.44 14.585±0.45 12.234±3.49 6.811±3.38 11.701±3.61 2.689±0.09 6.064±4.29 7.251±3.59 3.706±2.25 13.976±4.61 14.664±5.39 21.308±7.10 24.358±4.16
ENSMUSG00000022025 ENSMUST00000022603 0.602±0.34 N/A 0.472±0.10 0.536±0.07 0.337±0.10 N/A 0.356±0.29 0.047±0.01 0.151±0.14 0.141±0.03 0.048±0.01 36.022±13.60 0.892±0.62 0.644±0.38
ENSMUST00000165204 N/A 0.137±0.00 N/A N/A 0.284±0.10 0.254±0.00 0.289±0.00 0.178±0.04 1.291±0.93 0.144±0.04 0.068±0.00 19.213±3.55 0.389±0.05 0.767±0.54
ENSMUST00000165835 N/A 0.136±0.00 0.190±0.02 0.501±0.38 0.203±0.04 0.060±0.00 0.107±0.00 0.057±0.04 0.254±0.21 0.117±0.00 0.032±0.00 47.682±26.05 1.781±1.81 0.729±0.64
ENSMUST00000167524 N/A N/A N/A N/A N/A N/A N/A 0.306±0.02 N/A 0.190±0.00 N/A N/A N/A N/A
ENSMUST00000172331 N/A N/A N/A N/A N/A N/A 0.105±0.00 N/A 0.019±0.00 N/A 0.111±0.00 N/A N/A 0.613±0.00

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