C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165501 LRR1 9606 + 14:49598697-49614672 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298288 LRR1-001 49598697-49614672 protein_coding
  ENST00000318317 LRR1-002 49598761-49614670 protein_coding
  ENST00000540712 LRR1-004 49598952-49614671 nonsense_mediated_decay
  ENST00000554869 LRR1-003 49598775-49614671 nonsense_mediated_decay
  ENST00000557531 LRR1-005 49600412-49607509 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000298288ENST00000318317ENST00000554869
Transcript ID Ovary Testis
ENST00000298288 1.921±0.00 14.243±2.63
ENST00000318317 N/A 17.396±0.00
ENST00000554869 N/A 9.409±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Q4 CIL_0005Q4_0001 CGP 14:46839629-49599164
CIL_0005Q3 CIL_0005Q3_0001 CGP 14:49570984-49614672
CIL_0005Q6 CIL_0005Q6_0001 CGP 14:49598697-49620685

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008152 IEA metabolic process
GO:0016567 IEA protein ubiquitination
GO:0016853 IEA isomerase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000034883 Lrr1 leucine rich repeat protein 1 protein_coding Mus_musculus

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