C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Q6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165501-ENSG00000165502 CGP 9606 14:49598697-49620685
GeneTranscriptPositionBiotype
ENSG00000165501 (LRR1)
leucine rich repeat protein 1 		ENST00000298288 (LRR1-001) 49598697-49614672 protein_coding
ENST00000318317 (LRR1-002) 49598761-49614670 protein_coding
ENST00000540712 (LRR1-004) 49598952-49614671 nonsense_mediated_decay
ENST00000554869 (LRR1-003) 49598775-49614671 nonsense_mediated_decay
ENST00000557531 (LRR1-005) 49600412-49607509 processed_transcript
ENSG00000165502 (RPL36AL)
ribosomal protein L36a-like 		ENST00000298289 (RPL36AL-001) 49618519-49620685 protein_coding
ENSG00000213741 (RPS29)
ribosomal protein S29 		ENST00000245458 (RPS29-001) 49583572-49586376 protein_coding
ENST00000396020 (RPS29-002) 49570984-49586376 protein_coding
ENST00000539688 (RPS29-011) 49597475-49599164 processed_transcript
ENST00000554075 (RPS29-005) 49585298-49586358 retained_intron
ENST00000556230 (RPS29-003) 49585518-49586376 retained_intron
ENST00000557111 (RPS29-010) 49583579-49598690 protein_coding
ENST00000557367 (RPS29-006) 49583579-49586351 retained_intron
ENST00000557519 (RPS29-008) 49585390-49586325 processed_transcript
ENST00000611563 (RPS29-201) 49585711-49586416 protein_coding
ENSG00000278009 (RP11-649E7.8)
 ENST00000614802 (RP11-649E7.8-001) 49601011-49601124 unprocessed_pseudogene
CIL_0005Q6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034883-ENSMUSG00000049751 CGP 10090 12:69168814-69184083
GeneTranscriptPositionBiotype
ENSMUSG00000034883 (Lrr1)
leucine rich repeat protein 1 		ENSMUST00000110621 (Lrr1-201) 69168814-69179010 protein_coding
ENSMUSG00000049751 (Rpl36al)
ribosomal protein L36A-like 		ENSMUST00000054544 (Rpl36al-001) 69182741-69184083 protein_coding
ENSMUST00000110619 (Rpl36al-002) 69182738-69184013 protein_coding
ENSMUST00000110620 (Rpl36al-003) 69182731-69183986 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Q6_0001ENSG00000165501ENST00000298288ENST00000318317ENST00000540712ENST00000554869ENST00000557531ENSG00000165502ENST00000298289ENSG00000213741ENST00000245458ENST00000396020ENST00000539688ENST00000554075ENST00000556230ENST00000557111ENST00000557367ENST00000557519ENST00000611563ENSG00000278009ENST00000614802CIL_0005Q6_0002ENSMUSG00000034883ENSMUST00000110621ENSMUSG00000049751ENSMUST00000054544ENSMUST00000110619ENSMUST00000110620
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Q6_0001ENSG00000165501ENST00000298288ENST00000318317ENST00000554869ENSG00000165502ENST00000298289ENSG00000213741ENST00000245458ENST00000396020ENST00000611563ENSG00000278009ENST00000614802CIL_0005Q6_0002ENSMUSG00000034883ENSMUST00000110621ENSMUSG00000049751ENSMUST00000054544ENSMUST00000110619ENSMUST00000110620
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165501 ENST00000298288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.921±0.00 N/A 14.243±2.63
ENST00000318317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.396±0.00
ENST00000540712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.409±0.00
ENST00000557531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165502 ENST00000298289 87.973±0.00 103.415±0.00 7.259±0.00 52.330±0.00 48.306±14.54 121.329±0.00 26.704±10.28 52.602±8.80 51.653±10.93 55.152±29.11 53.224±29.25 128.474±95.39 103.052±65.30 51.961±25.69
ENSG00000213741 ENST00000245458 434.815±0.00 832.521±0.00 16.340±0.00 176.786±0.00 448.304±0.00 571.190±0.00 209.128±151.09 274.700±168.76 279.768±202.98 648.885±554.74 426.133±310.96 963.199±815.59 977.057±553.25 262.235±164.43
ENST00000396020 N/A N/A 0.484±0.00 1.065±0.00 N/A 2.623±0.00 0.304±0.00 1.006±0.43 0.935±0.00 0.703±0.00 N/A 0.676±0.00 N/A N/A
ENST00000539688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611563 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 193.275±0.00 78.019±0.00 N/A
ENSG00000278009 ENST00000614802 0.741±0.00 1.478±0.00 N/A N/A 1.032±0.00 N/A 0.229±0.00 0.249±0.00 N/A 0.913±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034883 ENSMUST00000110621 0.188±0.17 0.160±0.09 0.055±0.02 1.215±0.52 0.200±0.13 0.606±0.20 N/A 0.122±0.10 4.443±2.96 0.095±0.05 0.022±0.00 1.115±0.64 1.898±1.34 0.871±0.36
ENSMUSG00000049751 ENSMUST00000054544 56.690±6.49 11.353±3.42 246.675±29.18 85.350±31.27 38.657±14.05 69.149±9.00 38.212±7.52 85.038±3.97 228.231±194.50 58.937±3.61 129.868±5.87 92.679±73.33 240.981±105.19 83.797±14.79
ENSMUST00000110619 N/A 0.812±0.15 N/A N/A 0.535±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110620 N/A 2.197±0.83 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.371±0.00 N/A N/A

Loading