C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: voltage-dependent anion channel 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165637 VDAC2 9606 + 10:75210154-75231448 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298468 VDAC2-003 75210154-75230951 protein_coding
  ENST00000313132 VDAC2-002 75210848-75231277 protein_coding
  ENST00000332211 VDAC2-001 75210751-75231448 protein_coding
  ENST00000344036 VDAC2-005 75210645-75220970 protein_coding
  ENST00000413289 VDAC2-013 75211456-75219196 protein_coding
  ENST00000447677 VDAC2-010 75211034-75222280 protein_coding
  ENST00000460044 VDAC2-004 75229310-75231275 retained_intron
  ENST00000468285 VDAC2-009 75210864-75221032 processed_transcript
  ENST00000470745 VDAC2-012 75210804-75218238 retained_intron
  ENST00000472137 VDAC2-006 75210775-75222278 processed_transcript
  ENST00000475142 VDAC2-011 75210813-75220862 retained_intron
  ENST00000481876 VDAC2-007 75210814-75220970 retained_intron
  ENST00000498394 VDAC2-008 75210856-75222259 processed_transcript
  ENST00000543351 VDAC2-201 75210154-75231444 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000298468ENST00000313132ENST00000332211ENST00000460044ENST00000543351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000298468 N/A N/A 9.841±0.00 17.717±0.00 N/A 9.064±0.00 26.330±0.00 6.439±0.00 15.020±0.00 9.839±0.00 22.297±0.00 69.503±0.00 36.923±0.00 50.858±0.00
ENST00000313132 N/A N/A N/A N/A N/A 10.433±0.00 N/A 14.894±0.00 N/A N/A N/A N/A N/A N/A
ENST00000332211 22.462±0.00 15.410±0.00 2.413±0.00 17.618±9.94 21.350±13.01 33.520±17.55 23.533±9.35 18.555±0.00 7.227±2.46 8.006±4.78 21.134±8.87 26.503±17.98 30.665±25.27 14.680±6.73
ENST00000460044 N/A N/A 4.389±0.00 N/A 10.543±0.00 8.254±0.00 14.559±0.00 N/A N/A 6.751±0.00 N/A 6.576±0.00 N/A N/A
ENST00000543351 N/A N/A 4.603±0.00 17.765±0.00 N/A N/A 5.703±0.00 10.319±0.00 10.589±0.00 4.308±0.00 25.363±0.00 8.709±3.31 6.744±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JX CIL_0007JX_0001 UCNEbase 10:74418410-76978156
CIL_0008UO CIL_0008UO_0001 VISTA 10:74941035-75542526
CIL_000925 CIL_000925_0001 VISTA 10:74961440-75563087
CIL_00084B CIL_00084B_0001 VISTA 10:75078488-75679926
CIL_0007IK CIL_0007IK_0001 CGP 10:75099586-75231448
CIL_0008K8 CIL_0008K8_0001 VISTA 10:75104806-75705881
CIL_0007IL CIL_0007IL_0001 CGP 10:75210154-75236030

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005743 IEA mitochondrial inner membrane
GO:0006820 IEA anion transport
GO:0008308 IEA voltage-gated anion channel activity
GO:0015288 IEA porin activity
GO:0032272 IEA negative regulation of protein polymerization
GO:0042645 IDA mitochondrial nucleoid
GO:0044070 IEA regulation of anion transport
GO:0046930 IEA pore complex
GO:0055085 IEA transmembrane transport
GO:0070062 IDA extracellular vesicular exosome
GO:2001243 IEA negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013623 vdac2 voltage-dependent anion channel 2 protein_coding Danio_rerio
ENSMUSG00000021771 Vdac2 voltage-dependent anion channel 2 protein_coding Mus_musculus

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