C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: voltage-dependent anion channel 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021771 Vdac2 10090 + 14:21831269-21845879 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022293 Vdac2-001 21831269-21845879 protein_coding
  ENSMUST00000130224 Vdac2-006 21837831-21838866 retained_intron
  ENSMUST00000132364 Vdac2-005 21837734-21840543 retained_intron
  ENSMUST00000142084 Vdac2-007 21842275-21845519 retained_intron
  ENSMUST00000147715 Vdac2-004 21833618-21838011 processed_transcript
  ENSMUST00000152562 Vdac2-003 21831726-21837817 protein_coding
  ENSMUST00000153320 Vdac2-002 21831271-21840435 protein_coding
  ENSMUST00000172727 Vdac2-009 21832447-21845237 protein_coding
  ENSMUST00000173456 Vdac2-008 21831566-21845237 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022293ENSMUST00000152562ENSMUST00000153320ENSMUST00000173456
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022293 35.768±20.29 245.841±22.48 58.094±1.55 58.349±5.87 41.578±26.84 133.683±10.78 83.966±16.82 60.850±22.60 35.745±15.31 61.867±22.25 77.276±5.40 82.297±38.32 68.432±33.32 200.708±21.85
ENSMUST00000152562 86.100±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 339.915±0.00
ENSMUST00000153320 25.149±1.40 102.499±0.00 41.807±0.00 N/A N/A 67.645±9.27 46.452±0.48 38.080±0.00 40.417±9.08 N/A N/A N/A 50.800±0.00 91.453±4.87
ENSMUST00000173456 N/A N/A 34.264±4.53 46.821±0.00 73.163±0.00 N/A 48.480±0.00 36.254±0.00 N/A N/A 45.757±3.47 64.795±6.65 67.162±40.83 131.167±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JX CIL_0007JX_0002 UCNEbase 14:21252402-23394598
CIL_0008UO CIL_0008UO_0002 VISTA 14:21553194-22153685
CIL_000925 CIL_000925_0002 VISTA 14:21565849-22167377
CIL_00084B CIL_00084B_0002 VISTA 14:21666827-22268239
CIL_0008K8 CIL_0008K8_0002 VISTA 14:21690858-22291990
CIL_0007IK CIL_0007IK_0002 CGP 14:21750531-21845879
CIL_0008KK CIL_0008KK_0002 VISTA 14:21813215-22415951
CIL_0007IL CIL_0007IL_0002 CGP 14:21831269-21848977

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0005743 IDA mitochondrial inner membrane
GO:0006820 IEA anion transport
GO:0008308 IEA voltage-gated anion channel activity
GO:0015288 IEA porin activity
GO:0032272 IMP negative regulation of protein polymerization
GO:0042645 IEA mitochondrial nucleoid
GO:0044070 IEA regulation of anion transport
GO:0046930 IEA pore complex
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome
GO:2001243 IMP negative regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013623 vdac2 voltage-dependent anion channel 2 protein_coding Danio_rerio
ENSG00000165637 VDAC2 voltage-dependent anion channel 2 protein_coding Homo_sapiens

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