C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: voltage-dependent anion channel 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460044 VDAC2-004 ENSG00000165637 9606 + 10:75229310-75231275 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLungOvaryENST00000460044
Transcript ID Bladder Breast Colon Heart Lung Ovary
ENST00000460044 4.389±0.00 10.543±0.00 8.254±0.00 14.559±0.00 6.751±0.00 6.576±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JX CIL_0007JX_0001 UCNEbase 10:74418410-76978156
CIL_0008UO CIL_0008UO_0001 VISTA 10:74941035-75542526
CIL_000925 CIL_000925_0001 VISTA 10:74961440-75563087
CIL_00084B CIL_00084B_0001 VISTA 10:75078488-75679926
CIL_0007IK CIL_0007IK_0001 CGP 10:75099586-75231448
CIL_0008K8 CIL_0008K8_0001 VISTA 10:75104806-75705881
CIL_0007IL CIL_0007IL_0001 CGP 10:75210154-75236030

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000142084 Vdac2-007 retained_intron Mus_musculus 0 497
ENSMUST00000022293 Vdac2-001 protein_coding Mus_musculus 0 492
ENSMUST00000172727 Vdac2-009 protein_coding Mus_musculus 0 217
ENSMUST00000173456 Vdac2-008 protein_coding Mus_musculus 0 217

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