C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, FYVE domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165861 ZFYVE1 9606 - 14:72969451-73027212 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318876 ZFYVE1-002 72969452-73027131 protein_coding
  ENST00000394207 ZFYVE1-004 72970878-72986944 protein_coding
  ENST00000553891 ZFYVE1-005 72969451-73027106 protein_coding
  ENST00000554145 ZFYVE1-009 72974828-72978995 processed_transcript
  ENST00000554250 ZFYVE1-006 72977964-72979225 retained_intron
  ENST00000555072 ZFYVE1-003 72970882-72986985 protein_coding
  ENST00000556040 ZFYVE1-007 72970930-72975941 retained_intron
  ENST00000556143 ZFYVE1-001 72969452-73027212 protein_coding
  ENST00000556761 ZFYVE1-008 72974078-72975207 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318876ENST00000394207ENST00000553891ENST00000554145ENST00000555072ENST00000556143
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318876 N/A 1.446±0.00 N/A N/A N/A 0.734±0.00 1.544±0.84 3.432±0.00 0.324±0.00 2.234±0.00 1.630±0.96 1.982±1.10 0.742±0.06 N/A
ENST00000394207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.352±0.00 3.773±0.00 3.395±0.00
ENST00000553891 2.681±0.00 1.912±0.00 0.694±0.00 2.477±0.00 N/A 1.445±1.14 N/A 1.153±0.40 1.251±0.51 N/A 0.449±0.00 0.876±0.19 2.836±0.00 2.265±0.00
ENST00000554145 N/A N/A N/A N/A N/A N/A N/A 3.713±0.00 N/A N/A N/A N/A N/A N/A
ENST00000555072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.241±0.00
ENST00000556143 4.450±0.00 N/A 1.432±0.00 2.154±0.08 3.992±2.71 1.725±0.00 1.550±0.00 0.873±0.00 0.690±0.15 0.786±0.60 5.585±0.00 1.553±0.37 3.287±1.60 2.704±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P0 CIL_0008P0_0001 VISTA 14:72878760-73482269
CIL_0000UK CIL_0000UK_0001 CGP 14:72926332-73027212
CIL_0001TO CIL_0001TO_0001 CGP 14:72969451-73123898

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000407 IDA pre-autophagosomal structure
GO:0005515 IPI protein binding
GO:0005545 IDA 1-phosphatidylinositol binding
GO:0005547 IDA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005776 IDA autophagic vacuole
GO:0005783 IDA endoplasmic reticulum
GO:0005795 IDA Golgi stack
GO:0008270 NAS zinc ion binding
GO:0010923 IDA negative regulation of phosphatase activity
GO:0043325 IDA phosphatidylinositol-3,4-bisphosphate binding
GO:0044233 IDA ER-mitochondrion membrane contact site
GO:0046872 IEA metal ion binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0097629 IDA extrinsic component of omegasome membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078652 ZFYVE1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000042628 Zfyve1 zinc finger, FYVE domain containing 1 protein_coding Mus_musculus

Loading