C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001TO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165861-ENSG00000119707 CGP 9606 14:72969451-73123898
GeneTranscriptPositionBiotype
ENSG00000119707 (RBM25)
RNA binding motif protein 25 		ENST00000261973 (RBM25-001) 73058436-73123898 protein_coding
ENST00000525161 (RBM25-011) 73058668-73083551 protein_coding
ENST00000525321 (RBM25-005) 73058547-73101179 protein_coding
ENST00000526754 (RBM25-006) 73058549-73101179 protein_coding
ENST00000527432 (RBM25-007) 73058532-73120391 protein_coding
ENST00000527449 (RBM25-009) 73107302-73121313 retained_intron
ENST00000528081 (RBM25-008) 73071637-73120229 nonsense_mediated_decay
ENST00000530978 (RBM25-002) 73109131-73110909 retained_intron
ENST00000531500 (RBM25-010) 73058533-73097100 protein_coding
ENST00000532192 (RBM25-012) 73097036-73100995 protein_coding
ENST00000532483 (RBM25-003) 73106280-73114333 processed_transcript
ENST00000532683 (RBM25-004) 73058542-73120129 retained_intron
ENSG00000165861 (ZFYVE1)
zinc finger, FYVE domain containing 1 		ENST00000318876 (ZFYVE1-002) 72969452-73027131 protein_coding
ENST00000394207 (ZFYVE1-004) 72970878-72986944 protein_coding
ENST00000553891 (ZFYVE1-005) 72969451-73027106 protein_coding
ENST00000554145 (ZFYVE1-009) 72974828-72978995 processed_transcript
ENST00000554250 (ZFYVE1-006) 72977964-72979225 retained_intron
ENST00000555072 (ZFYVE1-003) 72970882-72986985 protein_coding
ENST00000556040 (ZFYVE1-007) 72970930-72975941 retained_intron
ENST00000556143 (ZFYVE1-001) 72969452-73027212 protein_coding
ENST00000556761 (ZFYVE1-008) 72974078-72975207 retained_intron
ENSG00000241487 (RN7SL586P)
RNA, 7SL, cytoplasmic 586, pseudogene 		ENST00000479137 (RN7SL586P-201) 73040619-73040914 misc_RNA
ENSG00000258448 (RP11-109N23.5)
 ENST00000554385 (RP11-109N23.5-001) 73068108-73068618 processed_pseudogene
CIL_0001TO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042628-ENSMUSG00000010608 CGP 10090 12:83546941-83683123
GeneTranscriptPositionBiotype
ENSMUSG00000010608 (Rbm25)
RNA binding motif protein 25 		ENSMUST00000048155 (Rbm25-002) 83632252-83683123 protein_coding
ENSMUST00000181983 (Rbm25-003) 83631236-83674417 protein_coding
ENSMUST00000182004 (Rbm25-007) 83631339-83646232 protein_coding
ENSMUST00000182032 (Rbm25-005) 83648302-83652107 retained_intron
ENSMUST00000182036 (Rbm25-009) 83632291-83659464 protein_coding
ENSMUST00000182255 (Rbm25-004) 83642699-83668483 retained_intron
ENSMUST00000182347 (Rbm25-011) 83632306-83642698 protein_coding
ENSMUST00000182450 (Rbm25-020) 83642639-83682020 nonsense_mediated_decay
ENSMUST00000182618 (Rbm25-012) 83632253-83651371 protein_coding
ENSMUST00000182633 (Rbm25-010) 83632326-83663999 nonsense_mediated_decay
ENSMUST00000182840 (Rbm25-015) 83674525-83676111 processed_transcript
ENSMUST00000182881 (Rbm25-017) 83634770-83639377 retained_intron
ENSMUST00000183039 (Rbm25-021) 83646182-83651750 processed_transcript
ENSMUST00000183128 (Rbm25-013) 83642554-83651390 retained_intron
ENSMUST00000183154 (Rbm25-008) 83632257-83646230 protein_coding
ENSMUST00000183181 (Rbm25-016) 83674853-83677898 retained_intron
ENSMUST00000183242 (Rbm25-006) 83658525-83659584 retained_intron
ENSMUST00000183282 (Rbm25-014) 83662976-83663999 processed_transcript
ENSMUSG00000042628 (Zfyve1)
zinc finger, FYVE domain containing 1 		ENSMUST00000048319 (Zfyve1-201) 83546941-83597147 protein_coding
ENSMUSG00000097703 (Gm26623)
predicted gene, 26623 		ENSMUST00000180911 (Gm26623-201) 83620210-83621174 lincRNA
ENSMUSG00000099708 (RP23-291K4.3)
predicted gene 29361 		ENSMUST00000183323 (RP23-291K4.3-001) 83631834-83633833 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TO_0001ENSG00000119707ENST00000261973ENST00000525161ENST00000525321ENST00000526754ENST00000527432ENST00000527449ENST00000528081ENST00000530978ENST00000531500ENST00000532192ENST00000532483ENST00000532683ENSG00000165861ENST00000318876ENST00000394207ENST00000553891ENST00000554145ENST00000554250ENST00000555072ENST00000556040ENST00000556143ENST00000556761ENSG00000241487ENST00000479137ENSG00000258448ENST00000554385CIL_0001TO_0002ENSMUSG00000010608ENSMUST00000048155ENSMUST00000181983ENSMUST00000182004ENSMUST00000182032ENSMUST00000182036ENSMUST00000182255ENSMUST00000182347ENSMUST00000182450ENSMUST00000182618ENSMUST00000182633ENSMUST00000182840ENSMUST00000182881ENSMUST00000183039ENSMUST00000183128ENSMUST00000183154ENSMUST00000183181ENSMUST00000183242ENSMUST00000183282ENSMUSG00000042628ENSMUST00000048319ENSMUSG00000097703ENSMUST00000180911ENSMUSG00000099708ENSMUST00000183323
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001TO_0001ENSG00000119707ENST00000261973ENST00000525321ENST00000526754ENST00000527432ENST00000527449ENST00000528081ENST00000532483ENST00000532683ENSG00000165861ENST00000318876ENST00000394207ENST00000553891ENST00000554145ENST00000555072ENST00000556143ENSG00000241487ENST00000479137ENSG00000258448ENST00000554385CIL_0001TO_0002ENSMUSG00000010608ENSMUST00000048155ENSMUST00000181983ENSMUST00000182255ENSMUST00000182450ENSMUST00000183154ENSMUSG00000042628ENSMUST00000048319ENSMUSG00000097703ENSMUST00000180911ENSMUSG00000099708ENSMUST00000183323
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119707 ENST00000261973 N/A N/A 0.362±0.00 2.150±1.08 1.248±0.00 2.142±0.00 1.278±0.00 1.316±0.00 0.771±0.00 1.819±0.00 1.169±0.79 2.440±0.38 0.926±0.10 1.846±0.00
ENST00000525161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525321 N/A N/A 3.631±0.00 3.444±0.00 12.071±0.00 7.861±0.00 2.310±0.00 2.549±0.00 5.146±0.00 10.961±0.00 N/A 8.095±0.00 N/A N/A
ENST00000526754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.723±0.00 N/A N/A N/A
ENST00000527432 N/A 9.204±0.00 N/A 7.811±0.00 5.171±0.00 5.762±0.00 4.675±0.00 4.389±0.00 2.155±0.00 N/A 8.591±0.00 13.385±1.14 7.886±5.10 31.194±0.00
ENST00000527449 N/A N/A 1.581±0.00 1.821±0.00 4.140±0.00 3.058±0.64 1.379±0.00 2.339±0.00 1.869±0.60 4.937±0.00 N/A 3.002±0.00 2.177±0.10 N/A
ENST00000528081 6.762±0.00 11.736±0.00 N/A 9.099±0.00 N/A 4.267±0.00 1.794±0.00 N/A N/A N/A N/A 7.168±0.00 N/A 7.852±0.00
ENST00000530978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.576±0.00 N/A N/A N/A
ENST00000532683 1.498±0.00 2.979±0.00 1.198±0.00 1.953±1.35 1.654±0.21 N/A 0.649±0.00 1.384±0.00 0.854±0.56 2.222±0.00 N/A 5.260±0.00 N/A 11.383±0.00
ENSG00000165861 ENST00000318876 N/A 1.446±0.00 N/A N/A N/A 0.734±0.00 1.544±0.84 3.432±0.00 0.324±0.00 2.234±0.00 1.630±0.96 1.982±1.10 0.742±0.06 N/A
ENST00000394207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.352±0.00 3.773±0.00 3.395±0.00
ENST00000553891 2.681±0.00 1.912±0.00 0.694±0.00 2.477±0.00 N/A 1.445±1.14 N/A 1.153±0.40 1.251±0.51 N/A 0.449±0.00 0.876±0.19 2.836±0.00 2.265±0.00
ENST00000554145 N/A N/A N/A N/A N/A N/A N/A 3.713±0.00 N/A N/A N/A N/A N/A N/A
ENST00000554250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.241±0.00
ENST00000556040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556143 4.450±0.00 N/A 1.432±0.00 2.154±0.08 3.992±2.71 1.725±0.00 1.550±0.00 0.873±0.00 0.690±0.15 0.786±0.60 5.585±0.00 1.553±0.37 3.287±1.60 2.704±0.43
ENST00000556761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241487 ENST00000479137 0.133±0.00 0.072±0.00 N/A N/A N/A 0.136±0.00 0.134±0.00 0.148±0.00 N/A N/A 0.064±0.00 N/A N/A 0.186±0.00
ENSG00000258448 ENST00000554385 0.022±0.00 0.131±0.00 N/A N/A 0.021±0.00 0.372±0.00 0.075±0.00 0.320±0.00 0.018±0.00 N/A N/A 0.057±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010608 ENSMUST00000048155 4.902±2.62 13.290±6.93 18.249±2.63 20.201±1.35 4.571±1.42 2.805±0.32 3.678±0.56 5.221±1.17 10.147±8.10 4.181±1.96 9.735±0.67 10.345±10.75 23.807±7.31 6.329±1.39
ENSMUST00000181983 N/A N/A N/A 72.385±0.00 N/A N/A N/A N/A N/A N/A N/A 98.684±0.00 80.774±37.22 274.014±0.00
ENSMUST00000182004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182255 4.374±0.00 N/A 5.582±0.00 7.594±0.00 2.470±0.20 2.326±0.61 N/A 1.692±0.13 4.052±1.74 N/A 1.781±0.37 5.513±2.77 9.512±2.32 3.498±0.86
ENSMUST00000182347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182450 N/A 6.574±1.82 N/A 36.538±0.00 2.524±0.26 2.539±0.78 N/A 2.037±0.00 1.915±0.75 2.545±0.00 N/A 10.430±17.55 70.806±21.24 25.900±35.97
ENSMUST00000182618 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183154 N/A 21.085±1.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183242 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042628 ENSMUST00000048319 9.570±2.50 11.917±1.40 11.254±1.10 10.256±4.18 10.604±2.98 13.004±2.43 2.735±0.25 9.284±0.90 11.113±4.95 9.560±2.13 5.685±0.57 10.029±3.52 14.702±7.44 6.772±2.70
ENSMUSG00000097703 ENSMUST00000180911 N/A N/A 0.195±0.18 0.163±0.10 N/A N/A 0.041±0.00 0.090±0.03 0.209±0.20 N/A 0.050±0.00 0.236±0.22 0.103±0.08 0.105±0.03
ENSMUSG00000099708 ENSMUST00000183323 N/A 1.474±0.48 N/A N/A 1.494±0.12 1.121±0.17 N/A N/A N/A N/A N/A 1.240±0.11 N/A 3.569±0.00

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