C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000UK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119599-ENSG00000165861 CGP 9606 14:72926332-73027212
GeneTranscriptPositionBiotype
ENSG00000119599 (DCAF4)
DDB1 and CUL4 associated factor 4 		ENST00000353777 (DCAF4-004) 72926377-72959592 protein_coding
ENST00000358377 (DCAF4-001) 72926332-72959121 protein_coding
ENST00000394234 (DCAF4-003) 72926478-72959703 protein_coding
ENST00000505361 (DCAF4-007) 72926501-72941902 retained_intron
ENST00000508412 (DCAF4-009) 72926785-72941784 processed_transcript
ENST00000509153 (DCAF4-005) 72926480-72958946 protein_coding
ENST00000509320 (DCAF4-002) 72926451-72959121 nonsense_mediated_decay
ENST00000510612 (DCAF4-008) 72926777-72940281 processed_transcript
ENST00000513337 (DCAF4-011) 72941909-72945927 processed_transcript
ENST00000514191 (DCAF4-006) 72926499-72940526 retained_intron
ENST00000514486 (DCAF4-010) 72929700-72941824 processed_transcript
ENST00000553457 (DCAF4-014) 72937989-72958112 protein_coding
ENST00000555042 (DCAF4-013) 72926487-72959644 protein_coding
ENST00000555992 (DCAF4-015) 72958715-72959375 processed_transcript
ENST00000557203 (DCAF4-016) 72942719-72946029 retained_intron
ENSG00000165861 (ZFYVE1)
zinc finger, FYVE domain containing 1 		ENST00000318876 (ZFYVE1-002) 72969452-73027131 protein_coding
ENST00000394207 (ZFYVE1-004) 72970878-72986944 protein_coding
ENST00000553891 (ZFYVE1-005) 72969451-73027106 protein_coding
ENST00000554145 (ZFYVE1-009) 72974828-72978995 processed_transcript
ENST00000554250 (ZFYVE1-006) 72977964-72979225 retained_intron
ENST00000555072 (ZFYVE1-003) 72970882-72986985 protein_coding
ENST00000556040 (ZFYVE1-007) 72970930-72975941 retained_intron
ENST00000556143 (ZFYVE1-001) 72969452-73027212 protein_coding
ENST00000556761 (ZFYVE1-008) 72974078-72975207 retained_intron
ENSG00000239544 (RP11-109N23.1)
 ENST00000478589 (RP11-109N23.1-001) 72963645-72964008 processed_pseudogene
ENSG00000259015 (RP11-109N23.6)
 ENST00000555304 (RP11-109N23.6-001) 72960595-72961993 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_0000UK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021222-ENSMUSG00000042628 CGP 10090 12:83520466-83597147
GeneTranscriptPositionBiotype
ENSMUSG00000021222 (Dcaf4)
DDB1 and CUL4 associated factor 4 		ENSMUST00000021645 (Dcaf4-201) 83520466-83541988 protein_coding
ENSMUSG00000042628 (Zfyve1)
zinc finger, FYVE domain containing 1 		ENSMUST00000048319 (Zfyve1-201) 83546941-83597147 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UK_0001ENSG00000119599ENST00000353777ENST00000358377ENST00000394234ENST00000505361ENST00000508412ENST00000509153ENST00000509320ENST00000510612ENST00000513337ENST00000514191ENST00000514486ENST00000553457ENST00000555042ENST00000555992ENST00000557203ENSG00000165861ENST00000318876ENST00000394207ENST00000553891ENST00000554145ENST00000554250ENST00000555072ENST00000556040ENST00000556143ENST00000556761ENSG00000239544ENST00000478589ENSG00000259015ENST00000555304CIL_0000UK_0002ENSMUSG00000021222ENSMUST00000021645ENSMUSG00000042628ENSMUST00000048319
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000UK_0001ENSG00000119599ENST00000353777ENST00000358377ENST00000394234ENST00000508412ENST00000509153ENST00000509320ENST00000514486ENST00000553457ENST00000555042ENST00000555992ENSG00000165861ENST00000318876ENST00000394207ENST00000553891ENST00000554145ENST00000555072ENST00000556143ENSG00000239544ENST00000478589ENSG00000259015ENST00000555304CIL_0000UK_0002ENSMUSG00000021222ENSMUST00000021645ENSMUSG00000042628ENSMUST00000048319
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119599 ENST00000353777 N/A 1.215±0.00 N/A N/A N/A N/A N/A 1.170±0.20 0.639±0.00 1.438±0.00 N/A 1.667±0.00 2.071±0.00 1.512±0.00
ENST00000358377 N/A N/A N/A N/A N/A N/A 0.353±0.00 N/A N/A N/A N/A 0.760±0.00 N/A 1.695±0.00
ENST00000394234 0.551±0.00 1.829±0.00 N/A 1.980±0.54 1.303±0.00 0.317±0.00 0.527±0.00 0.605±0.20 0.845±0.29 N/A 1.553±0.00 3.825±1.37 3.791±1.37 1.867±0.50
ENST00000505361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.904±0.00
ENST00000509153 N/A N/A N/A N/A N/A N/A 0.421±0.07 N/A N/A N/A N/A 0.574±0.00 N/A N/A
ENST00000509320 N/A N/A N/A N/A N/A N/A N/A N/A 0.324±0.00 0.396±0.00 0.459±0.00 N/A 1.667±0.00 N/A
ENST00000510612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514486 N/A N/A 2.269±0.00 3.760±0.00 2.373±0.00 1.949±0.00 N/A N/A N/A N/A N/A 1.975±0.00 N/A N/A
ENST00000553457 N/A 0.969±0.00 N/A N/A N/A 0.405±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555042 1.850±0.00 3.433±0.00 0.369±0.00 1.137±0.33 1.971±0.00 0.981±0.22 N/A 2.784±0.00 0.459±0.00 0.689±0.00 1.376±0.00 2.776±1.90 2.102±0.75 3.571±0.00
ENST00000555992 N/A N/A 1.326±0.00 N/A 2.855±0.00 1.483±0.00 N/A N/A N/A N/A 1.760±0.00 2.520±0.00 N/A 4.547±0.00
ENST00000557203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000165861 ENST00000318876 N/A 1.446±0.00 N/A N/A N/A 0.734±0.00 1.544±0.84 3.432±0.00 0.324±0.00 2.234±0.00 1.630±0.96 1.982±1.10 0.742±0.06 N/A
ENST00000394207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.352±0.00 3.773±0.00 3.395±0.00
ENST00000553891 2.681±0.00 1.912±0.00 0.694±0.00 2.477±0.00 N/A 1.445±1.14 N/A 1.153±0.40 1.251±0.51 N/A 0.449±0.00 0.876±0.19 2.836±0.00 2.265±0.00
ENST00000554145 N/A N/A N/A N/A N/A N/A N/A 3.713±0.00 N/A N/A N/A N/A N/A N/A
ENST00000554250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.241±0.00
ENST00000556040 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556143 4.450±0.00 N/A 1.432±0.00 2.154±0.08 3.992±2.71 1.725±0.00 1.550±0.00 0.873±0.00 0.690±0.15 0.786±0.60 5.585±0.00 1.553±0.37 3.287±1.60 2.704±0.43
ENST00000556761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000239544 ENST00000478589 N/A 0.093±0.00 N/A N/A N/A N/A N/A 0.189±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000259015 ENST00000555304 0.263±0.00 N/A N/A 0.157±0.00 0.427±0.00 N/A N/A N/A 0.315±0.00 0.359±0.00 N/A 0.870±0.06 0.221±0.00 1.414±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021222 ENSMUST00000021645 11.662±1.27 12.341±5.67 7.006±0.31 12.138±2.83 9.556±2.50 7.080±1.21 6.299±0.77 3.595±0.88 4.499±3.50 4.148±1.24 8.708±1.82 15.400±4.23 13.236±5.14 3.706±0.82
ENSMUSG00000042628 ENSMUST00000048319 9.570±2.50 11.917±1.40 11.254±1.10 10.256±4.18 10.604±2.98 13.004±2.43 2.735±0.25 9.284±0.90 11.113±4.95 9.560±2.13 5.685±0.57 10.029±3.52 14.702±7.44 6.772±2.70

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