C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, FYVE domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556143 ZFYVE1-001 ENSG00000165861 9606 - 14:72969452-73027212 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000556143
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000556143 4.450±0.00 1.432±0.00 2.154±0.08 3.992±2.71 1.725±0.00 1.550±0.00 0.873±0.00 0.690±0.15 0.786±0.60 5.585±0.00 1.553±0.37 3.287±1.60 2.704±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008P0 CIL_0008P0_0001 VISTA 14:72878760-73482269
CIL_0000UK CIL_0000UK_0001 CGP 14:72926332-73027212
CIL_0001TO CIL_0001TO_0001 CGP 14:72969451-73123898

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000407 IDA pre-autophagosomal structure
GO:0005515 IPI protein binding
GO:0005545 IDA 1-phosphatidylinositol binding
GO:0005547 IDA phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005776 IDA autophagic vacuole
GO:0005783 IDA endoplasmic reticulum
GO:0005795 IDA Golgi stack
GO:0008270 NAS zinc ion binding
GO:0010923 IDA negative regulation of phosphatase activity
GO:0043325 IDA phosphatidylinositol-3,4-bisphosphate binding
GO:0044233 IDA ER-mitochondrion membrane contact site
GO:0046872 IEA metal ion binding
GO:0048471 IDA perinuclear region of cytoplasm
GO:0097629 IDA extrinsic component of omegasome membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048319 Zfyve1-201 protein_coding Mus_musculus 0 3402

Loading