C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NEL-like 1 (chicken)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000165973 NELL1 9606 + 11:20669551-21575681 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000298925 NELL1-002 20669571-21575681 protein_coding
  ENST00000325319 NELL1-201 20669551-21575681 protein_coding
  ENST00000357134 NELL1-001 20669572-21575459 protein_coding
  ENST00000524738 NELL1-012 20783669-20885537 processed_transcript
  ENST00000527873 NELL1-011 20770820-20919302 processed_transcript
  ENST00000528046 NELL1-009 20769225-20847646 processed_transcript
  ENST00000528495 NELL1-007 20927025-20928444 retained_intron
  ENST00000529218 NELL1-005 21283661-21575336 processed_transcript
  ENST00000529595 NELL1-010 20770829-20918246 processed_transcript
  ENST00000530672 NELL1-008 20935696-21229388 processed_transcript
  ENST00000532434 NELL1-003 20669661-21575067 protein_coding
  ENST00000534263 NELL1-006 21283737-21504199 processed_transcript
  ENST00000619031 NELL1-202 20770828-21575454 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000325319ENST00000357134ENST00000527873ENST00000529218ENST00000530672ENST00000532434ENST00000534263ENST00000619031
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000325319 N/A N/A 2.028±0.00 0.029±0.00 N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A
ENST00000357134 N/A 2.281±0.00 4.842±0.11 N/A N/A N/A 1.849±0.00 N/A N/A N/A N/A N/A 0.732±0.00
ENST00000527873 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A
ENST00000529218 0.014±0.00 N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A 0.027±0.00 0.605±0.22
ENST00000530672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.117±0.00 N/A N/A
ENST00000532434 N/A 0.361±0.00 2.003±0.00 0.012±0.00 0.094±0.00 0.036±0.00 0.619±0.00 N/A 0.054±0.00 N/A 0.044±0.00 0.018±0.00 0.271±0.00
ENST00000534263 N/A N/A N/A 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619031 N/A N/A 2.345±0.00 N/A 0.164±0.00 0.034±0.00 0.711±0.00 N/A N/A N/A 0.072±0.00 N/A 0.128±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043M CIL_00043M_0001 CGP 11:20599400-21575681

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0007399 TAS nervous system development
GO:0010468 IDA regulation of gene expression
GO:0030154 IEA cell differentiation
GO:0030501 IDA positive regulation of bone mineralization
GO:0033689 IDA negative regulation of osteoblast proliferation
GO:0045669 IDA positive regulation of osteoblast differentiation
GO:0048471 IDA perinuclear region of cytoplasm
GO:2000599 IDA negative regulation of cyclin catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000055409 Nell1 NEL-like 1 protein_coding Mus_musculus

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