C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NEL-like 1 (chicken)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532434 NELL1-003 ENSG00000165973 9606 + 11:20669661-21575067 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000532434
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000532434 0.361±0.00 2.003±0.00 0.012±0.00 0.094±0.00 0.036±0.00 0.619±0.00 0.054±0.00 0.044±0.00 0.018±0.00 0.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043M CIL_00043M_0001 CGP 11:20599400-21575681

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005576 IEA extracellular region
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0007399 TAS nervous system development
GO:0010468 IDA regulation of gene expression
GO:0030154 IEA cell differentiation
GO:0030501 IDA positive regulation of bone mineralization
GO:0033689 IDA negative regulation of osteoblast proliferation
GO:0045669 IDA positive regulation of osteoblast differentiation
GO:0048471 IDA perinuclear region of cytoplasm
GO:2000599 IDA negative regulation of cyclin catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107603 Nell1-004 protein_coding Mus_musculus 0 2695
ENSMUST00000081872 Nell1-001 protein_coding Mus_musculus 0 1940
ENSMUST00000145096 Nell1-003 retained_intron Mus_musculus 0 1506
ENSMUST00000151721 Nell1-002 protein_coding Mus_musculus 0 872
ENSMUST00000154410 Nell1-005 processed_transcript Mus_musculus 0 560

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