C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NEL-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000055409 Nell1 10090 + 7:49974864-50865255 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081872 Nell1-001 49974864-50865255 protein_coding
  ENSMUST00000107603 Nell1-004 49975334-50863358 protein_coding
  ENSMUST00000145096 Nell1-003 49975069-50280036 retained_intron
  ENSMUST00000151721 Nell1-002 49974864-50560889 protein_coding
  ENSMUST00000154410 Nell1-005 50098310-50228861 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000081872ENSMUST00000107603ENSMUST00000145096ENSMUST00000151721ENSMUST00000154410
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081872 0.456±0.16 0.090±0.01 N/A 0.353±0.08 N/A 0.109±0.06 N/A 0.006±0.00 0.019±0.00 N/A 0.268±0.12 0.057±0.00 0.030±0.02
ENSMUST00000107603 1.519±1.04 0.186±0.03 0.090±0.00 9.336±9.50 0.036±0.00 0.093±0.06 0.011±0.00 0.055±0.04 0.093±0.03 0.032±0.02 1.053±0.35 0.230±0.14 0.146±0.08
ENSMUST00000145096 0.082±0.00 0.095±0.03 N/A N/A N/A 0.122±0.03 N/A N/A N/A 0.030±0.00 N/A 0.024±0.01 N/A
ENSMUST00000151721 1.609±1.10 0.218±0.10 0.031±0.00 1.898±0.54 N/A 0.089±0.03 N/A 0.032±0.01 0.152±0.06 0.066±0.00 1.233±0.47 0.052±0.00 0.047±0.00
ENSMUST00000154410 0.117±0.00 N/A N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043M CIL_00043M_0002 CGP 7:49910146-50865255

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005576 IEA extracellular region
GO:0005635 ISS nuclear envelope
GO:0005737 ISS cytoplasm
GO:0010468 ISS regulation of gene expression
GO:0030154 IEA cell differentiation
GO:0030501 ISS positive regulation of bone mineralization
GO:0033689 ISS negative regulation of osteoblast proliferation
GO:0045669 ISS positive regulation of osteoblast differentiation
GO:0048471 ISS perinuclear region of cytoplasm
GO:2000599 ISS negative regulation of cyclin catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000165973 NELL1 NEL-like 1 (chicken) protein_coding Homo_sapiens

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