C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane and coiled-coil domains 5A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166069 TMCO5A 9606 + 15:37921939-37967724 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000319669 TMCO5A-001 37935257-37951539 protein_coding
  ENST00000558148 TMCO5A-007 37934640-37936949 protein_coding
  ENST00000558158 TMCO5A-004 37934643-37944426 protein_coding
  ENST00000558625 TMCO5A-006 37933253-37941194 protein_coding
  ENST00000559502 TMCO5A-005 37934626-37967724 protein_coding
  ENST00000559813 TMCO5A-003 37935257-37942387 retained_intron
  ENST00000560653 TMCO5A-008 37934656-37951285 nonsense_mediated_decay
  ENST00000560841 TMCO5A-009 37921939-37936918 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartLungOvaryTestisENST00000319669ENST00000558158ENST00000559813ENST00000560653ENST00000560841
Transcript ID Adipose Adrenal Brain Colon Heart Lung Ovary Testis
ENST00000319669 N/A N/A N/A 0.056±0.00 N/A 0.104±0.00 0.086±0.00 46.210±0.00
ENST00000558158 N/A N/A 0.035±0.00 N/A 0.028±0.00 N/A N/A N/A
ENST00000559813 N/A 0.096±0.00 N/A N/A N/A 0.150±0.00 N/A N/A
ENST00000560653 N/A N/A N/A N/A N/A N/A N/A 13.278±0.00
ENST00000560841 0.072±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QR CIL_0006QR_0001 CGP 15:36889204-37967724
CIL_000806 CIL_000806_0001 VISTA 15:37567306-38168806
CIL_0006QQ CIL_0006QQ_0001 CGP 15:37921939-38357249

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000027355 Tmco5 transmembrane and coiled-coil domains 5 protein_coding Mus_musculus

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