C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane and coiled-coil domains 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027355 Tmco5 10090 + 2:116878691-116892494 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028834 Tmco5-001 116878708-116892494 protein_coding
  ENSMUST00000123598 Tmco5-004 116878691-116892181 protein_coding
  ENSMUST00000146144 Tmco5-003 116888207-116892494 processed_transcript
  ENSMUST00000155470 Tmco5-002 116878694-116892137 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyOvaryPlacentaTestisENSMUST00000028834ENSMUST00000123598ENSMUST00000146144ENSMUST00000155470
Transcript ID Adipose Adrenal Brain Breast Kidney Ovary Placenta Testis
ENSMUST00000028834 N/A N/A 0.103±0.00 N/A N/A 0.090±0.00 N/A 42.707±12.85
ENSMUST00000123598 N/A N/A N/A N/A N/A N/A 0.055±0.00 344.243±0.00
ENSMUST00000146144 0.094±0.00 0.237±0.00 0.060±0.00 0.201±0.00 0.217±0.02 0.079±0.00 N/A 115.315±3.98
ENSMUST00000155470 N/A N/A 1.578±0.00 N/A N/A N/A N/A 682.579±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QR CIL_0006QR_0002 CGP 2:115863064-116892494
CIL_000806 CIL_000806_0002 VISTA 2:116507729-117109252
CIL_0006QQ CIL_0006QQ_0002 CGP 2:116878691-117182279

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166069 TMCO5A transmembrane and coiled-coil domains 5A protein_coding Homo_sapiens

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