Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	RNA pseudouridylate synthase domain containing 2
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000166133	RPUSD2	9606	+	15:40569300-40574943	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000315616		RPUSD2-001	40569300-40574943	protein_coding
	ENST00000559271		RPUSD2-004	40569332-40574358	protein_coding
	ENST00000616318		RPUSD2-005	40569437-40570067	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000315616	N/A	1.398±0.00	N/A	0.842±0.00	0.875±0.00	0.267±0.15	0.598±0.23	0.421±0.12	0.659±0.04	0.149±0.00	0.714±0.32	1.149±0.41	1.392±0.69	1.605±0.12
ENST00000559271	0.919±0.00	4.093±0.00	0.417±0.00	1.763±0.42	1.671±0.74	1.416±0.00	1.569±0.00	4.227±0.00	1.896±1.52	0.561±0.01	3.649±0.00	3.990±1.43	2.824±0.49	3.082±0.10
ENST00000616318	2.577±0.00	3.222±0.00	0.216±0.00	0.548±0.00	N/A	1.865±0.00	1.332±0.00	N/A	N/A	2.038±1.58	N/A	4.569±0.85	4.046±0.75	N/A

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00070E	CIL_00070E_0001	CGP	15:40528683-40574943
CIL_00070F	CIL_00070F_0001	CGP	15:40569300-40664342

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0001522	IEA	pseudouridine synthesis
GO:0003723	IEA	RNA binding
GO:0005575	ND	cellular_component
GO:0008150	ND	biological_process
GO:0009451	IEA	RNA modification
GO:0009982	IEA	pseudouridine synthase activity
GO:0044822	IDA	poly(A) RNA binding

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000060992	rpusd2	RNA pseudouridylate synthase domain containing 2	protein_coding	Danio_rerio
ENSMUSG00000027324	Rpusd2	RNA pseudouridylate synthase domain containing 2	protein_coding	Mus_musculus

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