C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00070F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166133-ENSG00000137812 CGP 9606 15:40569300-40664342
GeneTranscriptPositionBiotype
ENSG00000137812 (CASC5)
cancer susceptibility candidate 5 		ENST00000346991 (CASC5-002) 40594020-40664342 protein_coding
ENST00000399668 (CASC5-001) 40594249-40662683 protein_coding
ENST00000526913 (CASC5-013) 40623132-40664339 nonsense_mediated_decay
ENST00000527044 (CASC5-201) 40594249-40625584 protein_coding
ENST00000528967 (CASC5-009) 40646886-40650365 retained_intron
ENST00000528975 (CASC5-005) 40594034-40610289 protein_coding
ENST00000531626 (CASC5-012) 40662573-40663904 processed_transcript
ENST00000532056 (CASC5-006) 40594249-40610297 protein_coding
ENST00000532347 (CASC5-010) 40650127-40654977 retained_intron
ENST00000532406 (CASC5-008) 40628074-40647038 protein_coding
ENST00000533001 (CASC5-004) 40594265-40626042 retained_intron
ENST00000534204 (CASC5-007) 40594272-40645712 nonsense_mediated_decay
ENST00000614337 (CASC5-003) 40594035-40623159 processed_transcript
ENSG00000166133 (RPUSD2)
RNA pseudouridylate synthase domain containing 2 		ENST00000315616 (RPUSD2-001) 40569300-40574943 protein_coding
ENST00000559271 (RPUSD2-004) 40569332-40574358 protein_coding
ENST00000616318 (RPUSD2-005) 40569437-40570067 protein_coding
ENSG00000203573 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000366384 (Metazoa_SRP.1-206) 40585454-40585751 misc_RNA
ENSG00000259254 (CTD-2339L15.3)
 ENST00000559841 (CTD-2339L15.3-001) 40642933-40646857 sense_intronic
ENSG00000265814 (RN7SL376P)
RNA, 7SL, cytoplasmic 376, pseudogene 		ENST00000578594 (RN7SL376P-201) 40615665-40615928 misc_RNA
CIL_00070F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027324-ENSMUSG00000027326 CGP 10090 2:119034790-119105501
GeneTranscriptPositionBiotype
ENSMUSG00000027324 (Rpusd2)
RNA pseudouridylate synthase domain containing 2 		ENSMUST00000028796 (Rpusd2-001) 119034790-119039769 protein_coding
ENSMUSG00000027326 (Casc5)
cancer susceptibility candidate 5 		ENSMUST00000028799 (Casc5-001) 119047150-119072919 protein_coding
ENSMUST00000028802 (Casc5-004) 119057281-119105501 protein_coding
ENSMUST00000099542 (Casc5-201) 119047119-119104121 protein_coding
ENSMUST00000152380 (Casc5-002) 119047119-119069271 protein_coding
ENSMUST00000153300 (Casc5-003) 119047147-119065972 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00070F_0001ENSG00000137812ENST00000346991ENST00000399668ENST00000526913ENST00000527044ENST00000528967ENST00000528975ENST00000531626ENST00000532056ENST00000532347ENST00000532406ENST00000533001ENST00000534204ENST00000614337ENSG00000166133ENST00000315616ENST00000559271ENST00000616318ENSG00000203573ENST00000366384ENSG00000259254ENST00000559841ENSG00000265814ENST00000578594CIL_00070F_0002ENSMUSG00000027324ENSMUST00000028796ENSMUSG00000027326ENSMUST00000028799ENSMUST00000028802ENSMUST00000099542ENSMUST00000152380ENSMUST00000153300
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00070F_0001ENSG00000137812ENST00000346991ENST00000399668ENST00000526913ENST00000527044ENST00000528967ENST00000531626ENST00000533001ENST00000614337ENSG00000166133ENST00000315616ENST00000559271ENST00000616318ENSG00000203573ENST00000366384ENSG00000259254ENST00000559841ENSG00000265814ENST00000578594CIL_00070F_0002ENSMUSG00000027324ENSMUST00000028796ENSMUSG00000027326ENSMUST00000028799ENSMUST00000028802ENSMUST00000099542
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137812 ENST00000346991 N/A N/A N/A 0.028±0.01 N/A N/A N/A N/A N/A N/A N/A 0.293±0.28 0.147±0.00 4.503±3.06
ENST00000399668 N/A N/A N/A N/A 0.171±0.00 1.202±0.00 N/A 0.068±0.00 N/A N/A N/A 0.890±0.57 0.177±0.00 N/A
ENST00000526913 N/A N/A 0.160±0.00 N/A 0.649±0.00 N/A N/A 0.110±0.03 0.028±0.00 0.019±0.00 0.010±0.00 0.845±0.81 0.585±0.00 9.454±4.93
ENST00000527044 N/A N/A N/A N/A 0.639±0.00 N/A N/A N/A N/A 0.208±0.00 N/A N/A 0.066±0.00 N/A
ENST00000528967 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.416±0.00 N/A N/A N/A N/A
ENST00000528975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531626 N/A N/A N/A N/A N/A N/A N/A N/A 0.093±0.00 N/A N/A N/A N/A N/A
ENST00000532056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533001 N/A N/A 0.120±0.00 N/A N/A N/A 0.017±0.00 N/A N/A 0.185±0.00 N/A N/A N/A N/A
ENST00000534204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614337 N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000166133 ENST00000315616 N/A 1.398±0.00 N/A 0.842±0.00 0.875±0.00 0.267±0.15 0.598±0.23 0.421±0.12 0.659±0.04 0.149±0.00 0.714±0.32 1.149±0.41 1.392±0.69 1.605±0.12
ENST00000559271 0.919±0.00 4.093±0.00 0.417±0.00 1.763±0.42 1.671±0.74 1.416±0.00 1.569±0.00 4.227±0.00 1.896±1.52 0.561±0.01 3.649±0.00 3.990±1.43 2.824±0.49 3.082±0.10
ENST00000616318 2.577±0.00 3.222±0.00 0.216±0.00 0.548±0.00 N/A 1.865±0.00 1.332±0.00 N/A N/A 2.038±1.58 N/A 4.569±0.85 4.046±0.75 N/A
ENSG00000203573 ENST00000366384 0.212±0.00 0.648±0.00 N/A 0.328±0.00 0.289±0.00 0.720±0.00 0.069±0.00 0.674±0.00 0.129±0.00 0.260±0.00 N/A 0.745±0.40 0.262±0.00 0.810±0.34
ENSG00000259254 ENST00000559841 N/A 0.088±0.00 N/A 0.068±0.00 0.041±0.00 0.038±0.00 0.601±0.54 0.021±0.00 N/A N/A N/A 0.184±0.00 N/A 0.057±0.04
ENSG00000265814 ENST00000578594 0.199±0.00 0.773±0.00 N/A 0.527±0.00 0.257±0.00 0.264±0.00 0.389±0.00 N/A 0.445±0.00 0.203±0.00 N/A 2.102±0.00 N/A 0.628±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027324 ENSMUST00000028796 1.723±0.66 2.249±0.19 0.890±0.06 1.657±0.58 2.558±0.39 2.296±0.09 1.467±0.41 1.566±0.77 2.059±0.79 1.638±0.61 0.891±0.15 2.959±1.30 1.805±0.88 1.847±0.88
ENSMUSG00000027326 ENSMUST00000028799 0.014±0.00 0.153±0.08 N/A N/A 0.066±0.03 0.076±0.00 0.008±0.00 0.021±0.01 0.014±0.00 0.055±0.00 N/A 0.368±0.08 0.027±0.00 N/A
ENSMUST00000028802 0.039±0.01 0.042±0.00 N/A 0.122±0.06 0.151±0.03 N/A 0.031±0.00 0.034±0.01 3.441±2.88 0.062±0.00 0.011±0.01 0.395±0.27 0.907±0.76 0.211±0.02
ENSMUST00000099542 N/A N/A 0.074±0.00 N/A N/A N/A N/A 0.010±0.00 0.013±0.00 N/A 0.007±0.00 0.353±0.24 3.120±0.00 1.271±0.00
ENSMUST00000152380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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