C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA pseudouridylate synthase domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000315616 RPUSD2-001 ENSG00000166133 9606 + 15:40569300-40574943 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000315616
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000315616 1.398±0.00 0.842±0.00 0.875±0.00 0.267±0.15 0.598±0.23 0.421±0.12 0.659±0.04 0.149±0.00 0.714±0.32 1.149±0.41 1.392±0.69 1.605±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070E CIL_00070E_0001 CGP 15:40528683-40574943
CIL_00070F CIL_00070F_0001 CGP 15:40569300-40664342

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028796 Rpusd2-001 protein_coding Mus_musculus 0 1474

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